# Environmental and chemical modulation of Staphylococcus aureus Newman biofilm formation

**Authors:** Ahmed R. Ragab, Ahmed R. El‐Sheakh, Shokri M. Shafik

PMC · DOI: 10.1007/s00253-026-13781-6 · 2026-03-24

## TL;DR

This study shows how environmental factors like pH, salt, and serum affect the formation of Staphylococcus aureus biofilms and the genes involved.

## Contribution

The study reveals dose-dependent modulation of S. aureus biofilm formation by environmental stressors and their impact on key regulatory genes.

## Key findings

- Hydrogen peroxide and extreme pH levels significantly reduce biofilm biomass and gene expression.
- Mild salt concentrations enhance biofilm formation and gene activity, while high salt levels return them to baseline.
- High serum concentrations strongly inhibit biofilm formation and gene expression.

## Abstract

Staphylococcus aureus biofilm formation enhances survival on host tissues and medical devices. This study tested how oxidative stress (H₂O₂), pH (5–9), NaCl (0–10%), and human serum (5–50%) affect the Newman strain biofilm and key genes (icaA, icaD, sarA). Biofilm was quantified by crystal violet assays and Lowry protein assay methods, and gene expression was measured by quantitative real-time PCR. Biofilm biomass was quantified using crystal violet staining and Lowry protein assays under various environmental conditions. Statistical significance was determined using ANOVA with post hoc analysis (p < 0.001). Hydrogen peroxide induced a dose-dependent reduction in biomass, with significant repression of icaA, icaD, and sarA expression at 3% H₂O₂ (≤ 22.8%, p < 0.001). Similarly, deviations from neutral pH markedly impaired biofilm formation, with acidic (pH 5) and alkaline (pH 9) conditions reducing biomass by 34.6% and 41.7%, respectively, accompanied by strong downregulation of biofilm-associated genes (p < 0.001). In contrast, NaCl exerted a biphasic effect: mild osmotic stress (1.25% and 5%) enhanced biofilm biomass (up to 154.2%) in the case of crystal violet assays and at 5% biomass increased to 130.8 ± 10.8*%; at 10%, it was 103.5 ± 6.1% (no significant change) in the case of protein quantification, and gene expression (icaA 160.55%, icaD 168.18%, sarA 149.8%, p < 0.001), whereas higher concentrations (≥ 10%) restored expression to near-control levels. Serum exposure produced a threshold-dependent response, with low concentrations (5–10%) slightly enhancing gene expression (~ 110%), while higher concentrations (20–50%) significantly repressed both biomass and transcription, with profound inhibition found at 50% (icaA 12.94%, icaD 10.88%, sarA 12.79%, p < 0.001). In addition, confocal laser scanning microscopy technique is used as a confirmatory step for qualitative determination of the effects of both various saline and serum concentrations on the biofilm formation, which induces similar results. Environmental stressors modulate S. aureus biofilm formation in a dose-dependent manner via regulation of the ica operon and sarA, offering molecular insights that may guide strategies for biofilm control.

• Oxidative stress (H₂O₂) dose-dependently inhibits S. aureus Newman biofilms.

• Mild NaCl levels enhance biofilm formation via upregulation of ica and sarA.

• High serum concentrations (≥ 20%) suppress biofilm biomass and gene expression.

The online version contains supplementary material available at 10.1007/s00253-026-13781-6.

## Linked entities

- **Genes:** icaA (N-acetylglucosaminyltransferase) [NCBI Gene 11640150], DFFA (DNA fragmentation factor subunit alpha) [NCBI Gene 1676], ZFYVE9 (zinc finger FYVE-type containing 9) [NCBI Gene 9372]
- **Chemicals:** NaCl (PubChem CID 5234)
- **Species:** Staphylococcus aureus (taxon 1280)

## Full-text entities

- **Diseases:** osteomyelitis (MESH:D010019), hypoxia (MESH:D000860), bloodstream infections (MESH:D018805), infected (MESH:D007239), bacteremia (MESH:D016470)
- **Chemicals:** HCl (MESH:D006851), NaCl (MESH:D012965), copper (MESH:D003300), water (MESH:D014867), reactive oxygen species (MESH:D017382), Na2CO3 (MESH:C005686), salt (MESH:D012492), methanol (MESH:D000432), H2O2 (MESH:D006861), Acridine Orange (MESH:D000165), acetic acid (MESH:D019342), iron (MESH:D007501), propidium iodide (MESH:D011419), NaOH (MESH:D012972), polysaccharide (MESH:D011134), EPS (-), sodium tartrate (MESH:C029768), CuSO4 (MESH:D019327), SYBR Green (MESH:C098022), crystal violet (MESH:D005840)
- **Species:** Streptococcus (genus) [taxon 1301], Homo sapiens (human, species) [taxon 9606], Staphylococcus aureus (species) [taxon 1280]
- **Cell lines:** ATCC 25904 — Homo sapiens (Human), Seizure disorder, Transformed cell line (CVCL_FN49)

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13018035/full.md

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Source: https://tomesphere.com/paper/PMC13018035