# The tumour microenvironment in paediatric rhabdomyosarcomas: a systematic review

**Authors:** Megan Richards, Christina Putnam, Timothy J Underwood, Zoë S Walters

PMC · DOI: 10.1093/carcin/bgag011 · Carcinogenesis · 2026-02-20

## TL;DR

This review explores how the tumor microenvironment differs in pediatric rhabdomyosarcomas based on fusion gene status, aiming to improve treatment strategies.

## Contribution

The study systematically reviews TME differences between fusion-positive and fusion-negative RMS subtypes, highlighting gaps in current research.

## Key findings

- Differences in CD163+ macrophages, matrix metalloproteinases, and stromal receptors were observed between ARMS and ERMS.
- Fusion status correlates with T cell dysfunction, NECTIN-3 expression, and PD-1/IFN-related genes.
- Only three studies in the review specified fusion status, indicating a need for more targeted research.

## Abstract

Rhabdomyosarcoma (RMS) is a predominantly paediatric cancer that is classified by the presence or absence of a PAX-FOXO1 fusion gene, which is associated with a worse prognosis. Previous classification was based on histology, alveolar RMS (ARMS) or embryonal RMS (ERMS). In other paediatric cancers, fusion gene status has been shown to associate with differences in the tumour microenvironment (TME). However, comprehensive understanding of the TME in RMS and how it may differ between subtypes is lacking. This systematic review aimed to identify differences in the TME between fusion-positive RMS and fusion-negative RMS, to better understand how the fusion gene drives malignancy. The Web of Science, MEDLINE (Ovid), and EMBASE (Ovid) were searched to identify relevant studies investigating the TME in RMS. A total of 17 studies met the inclusion criteria and were included in the review, but only three studies specified fusion status in their sample data. Nine studies investigated the extracellular matrix and stroma, and another nine investigated the immune microenvironment. Significant differences in CD163+ macrophages, matrix metalloproteinases and stromal platelet-derived growth factor receptors-α/β were observed between ARMS and ERMS. Regarding fusion status, there were differences in the prevalence of T cell dysfunction, NECTIN-3 expression, and genes related to PD-1 signalling and interferon (IFN) response. This review highlights a need for further research of the TME in each fusion subtype. This will improve our understanding of how the fusion gene drives malignancy and ultimately aids in the development of novel treatment strategies.

Graphical AbstractFor image description, please refer to the figure legend and surrounding text.

## Linked entities

- **Genes:** NECTIN3 (nectin cell adhesion molecule 3) [NCBI Gene 25945], PDCD1 (programmed cell death 1) [NCBI Gene 5133], IFNA1 (interferon alpha 1) [NCBI Gene 3439]
- **Proteins:** CD163 (CD163 molecule)
- **Diseases:** rhabdomyosarcoma (MONDO:0005212)

## Full-text entities

- **Genes:** CD163 (CD163 molecule) [NCBI Gene 9332] {aka M130, MM130, SCARI1}, FOXO1 (forkhead box O1) [NCBI Gene 2308] {aka FKH1, FKHR, FOXO1A}, PDCD1 (programmed cell death 1) [NCBI Gene 5133] {aka ADMIO4, AIMTBS, CD279, PD-1, PD1, SLEB2}, PDGFRA (platelet derived growth factor receptor alpha) [NCBI Gene 5156] {aka CD140A, PDGFR-2, PDGFR2}, IFNA1 (interferon alpha 1) [NCBI Gene 3439] {aka IFL, IFN, IFN-ALPHA, IFN-alphaD, IFNA13, IFNA@}, NECTIN3 (nectin cell adhesion molecule 3) [NCBI Gene 25945] {aka CD113, CDW113, NECTIN-3, PPR3, PRR3, PVRL3}
- **Diseases:** Tumour (MESH:D009369), T cell dysfunction (MESH:C536780), ARMS (MESH:D018232), ERMS (MESH:D018233), RMS (MESH:D012208)

## Full text

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## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13017844/full.md

## References

93 references — full list in the complete paper: https://tomesphere.com/paper/PMC13017844/full.md

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Source: https://tomesphere.com/paper/PMC13017844