# Spatial transcriptomic profiling reveals body site-specific inflammatory differences in psoriasis lesions

**Authors:** Thomas Emmanuel, Hakim Ben Abdallah, Morten Muhlig Nielsen, Borislav Ignatov, Elena Baez, Anna Skarnvad Andersen, Line Waaben, Mette Boye, Ida Kaaber, Desirée Sofie Boonen, Søren Riis Petersen, Torben Steiniche, Anne Bregnhøj, Liv Eidsmo, Lars Iversen, Christian Vestergaard, Claus Johansen

PMC · DOI: 10.3389/fimmu.2026.1706701 · Frontiers in Immunology · 2026-03-12

## TL;DR

This study finds that psoriasis lesions in different body areas have unique gene activity patterns, which could help develop targeted treatments.

## Contribution

The study reveals site-specific transcriptomic differences in psoriasis lesions that could explain treatment resistance in certain body areas.

## Key findings

- Histological and immunohistochemical markers showed no significant differences across psoriasis lesion sites.
- Transcriptomic profiling identified site-specific gene expression patterns, including enriched IL-23 signaling in lower extremity lesions.
- IL-17 signaling was more prominent in the epidermis of lesions at different body sites.

## Abstract

Psoriasis is a common chronic inflammatory skin disease. Treatments lead to Q6 substantial improvement of most psoriasis plaques. However, it can be challenging to reach disease resolution in certain hard to treat areas such as scalp, and lower extremity. Here we map histologic and spatial transcriptomic differences between psoriasis lesions across different anatomical locations, to understand if differences can be linked to plaque-site specific treatment resistance.

Quantitative immunohistochemical analysis and transcriptomic digital spatial profiling were performed on skin punch biopsies obtained from unaffected areas on the trunk, lesional (LS) areas of the scalp, upper extremity and lower extremity of 12 patients with psoriasis. Histological analysis showed no significant differences in epidermal thickness among LS skin from different body locations.

Immunohistochemical markers (CD3, CD4, CD8, CD103, CD207, IL-12RB1, IL-17A, IL-23R, RORγt, FOXP3, and MPO) did not differ significantly between LS sites. Whole transcriptome spatial RNA profiling identified several differentially expressed genes that revealed site-specific transcriptomic differences. Notably, IL-23 signaling was significantly enriched in the lower extremity epidermis, and IL-17 signaling was more pronounced in the epidermis of LS samples.

These findings highlight minimal histological and immunohistochemical variation, yet significant transcriptomic and pathway differences between psoriasis body locations, suggesting potential targets for site-specific therapeutic strategies.

## Linked entities

- **Genes:** cd.3 (Cd.3 conserved hypothetical protein) [NCBI Gene 1258599], CD4 (CD4 molecule) [NCBI Gene 920], CD8A (CD8 subunit alpha) [NCBI Gene 925], ITGAE (integrin subunit alpha E) [NCBI Gene 3682], CD207 (CD207 molecule) [NCBI Gene 50489], IL12RB1 (interleukin 12 receptor subunit beta 1) [NCBI Gene 3594], IL17A (interleukin 17A) [NCBI Gene 3605], IL23R (interleukin 23 receptor) [NCBI Gene 149233], FOXP3 (forkhead box P3) [NCBI Gene 50943], MPO (myeloperoxidase) [NCBI Gene 4353], IL37 (interleukin 37) [NCBI Gene 27178], IL17A (interleukin 17A) [NCBI Gene 3605]
- **Diseases:** psoriasis (MONDO:0005083)

## Full-text entities

- **Genes:** CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, IL12RB1 (interleukin 12 receptor subunit beta 1) [NCBI Gene 3594] {aka CD212, IL-12R-BETA1, IL12RB, IMD30}, ITGAE (integrin subunit alpha E) [NCBI Gene 3682] {aka CD103, HUMINAE}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}, IL23R (interleukin 23 receptor) [NCBI Gene 149233] {aka PSORS7}, IL23A (interleukin 23 subunit alpha) [NCBI Gene 51561] {aka IL-23, IL-23A, IL23P19, P19, SGRF}, IL17A (interleukin 17A) [NCBI Gene 3605] {aka CTLA-8, CTLA8, IL-17, IL-17A, IL17, ILA17}, FOXP3 (forkhead box P3) [NCBI Gene 50943] {aka AIID, DIETER, IPEX, JM2, PIDX, XPID}, CD207 (CD207 molecule) [NCBI Gene 50489] {aka CLEC4K}, MPO (myeloperoxidase) [NCBI Gene 4353]
- **Diseases:** Psoriasis (MESH:D011565), skin disease (MESH:D012871), inflammatory (MESH:D007249)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13017802/full.md

## References

45 references — full list in the complete paper: https://tomesphere.com/paper/PMC13017802/full.md

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Source: https://tomesphere.com/paper/PMC13017802