# Experimental biofilm models for pharmacokinetic and pharmacodynamic investigations: bridging in vitro, ex vivo and in vivo systems

**Authors:** Stephanie Supparitsch, Markus Zeitlinger

PMC · DOI: 10.1093/jac/dkag091 · Journal of Antimicrobial Chemotherapy · 2026-03-06

## TL;DR

This review discusses various experimental models for studying biofilm infections and their use in understanding drug effectiveness and limitations.

## Contribution

The paper offers a structured overview of experimental models for biofilm research, emphasizing their translational value and guiding model selection.

## Key findings

- In vitro models are useful for high-throughput screening and measuring biofilm-specific indices.
- Ex vivo models help study topical therapies while preserving tissue architecture.
- In vivo models are essential for analyzing host-pathogen interactions and systemic drug effects.

## Abstract

Biofilm-associated infections represent a major therapeutic challenge due to reduced antimicrobial susceptibility and the limited predictive value of conventional pharmacokinetic/pharmacodynamic (PK/PD) indices with clinical outcome. A wide spectrum of experimental models has been developed to study biofilms, ranging from simple in vitro assays to ex vivo tissue-derived systems and in vivo infection models. Each category provides distinct advantages: in vitro platforms enable high-throughput compound screening and measurement of biofilm-specific indices such as MBIC and MBEC; ex vivo models preserve host tissue architecture and allow investigation of topical therapies and therapeutic windows; and in vivo systems are indispensable for analysing host–pathogen interactions and systemic PK/PD relationships. No single model is sufficient to replicate clinical biofilm complexity, but combined use and progressive standardization can improve translational value. This review provides a structured overview of available models, their PK/PD readouts and their strengths and limitations, aiming to guide model selection in preclinical biofilm research and antimicrobial development.

## Full-text entities

- **Diseases:** PD (MESH:D010300), infection (MESH:D007239)

## Full text

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## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13017103/full.md

## References

154 references — full list in the complete paper: https://tomesphere.com/paper/PMC13017103/full.md

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Source: https://tomesphere.com/paper/PMC13017103