# Association of apolipoprotein A1 (rs 5069) genotyping with 25-hydroxyvitamin D deficiency and insulin resistance as a metabolic and genetic difference in obesity and type 2 diabetes mellitus

**Authors:** Nagla Usama, Amr E. Ahmed, Salma Mekheimer, Khaled Elhadidy, Mohamed Awadein, Mahmoud Farid

PMC · DOI: 10.1007/s00394-026-03938-4 · European Journal of Nutrition · 2026-03-24

## TL;DR

This study explores how a genetic variant in APOA1 is linked to vitamin D deficiency and insulin resistance in obese and diabetic Egyptian adults.

## Contribution

The study identifies a novel association between APOA1 rs5069 genotypes and metabolic traits in obesity and T2DM.

## Key findings

- The AA genotype of APOA1 rs5069 is more common in obese and diabetic individuals compared to controls.
- Higher vitamin D levels are linked to lower odds of carrying GA/AA genotypes in obese participants.
- Obese individuals with T2DM show the worst metabolic profile, including higher insulin resistance and dyslipidemia.

## Abstract

Obesity and type 2 diabetes mellitus (T2DM) are significant issues for public health, frequently occurring together with vitamin D deficiency and metabolic diseases. This study aimed to investigate whether the APOA1 single nucleotide polymorphism rs5069 is associated with 25-hydroxyvitamin D (25[OH]D) deficiency and insulin-resistance–related traits in Egyptian adults.

In this cross-sectional study, 350 Egyptian adults (age 35–55 years) were grouped as: (1) obese non-diabetic (n = 100), (2) obese with T2DM (n = 100), (3) non-obese with T2DM (BMI < 30, n = 50), and (4) controls (BMI < 30 and 25[OH]D ≥ 20 ng/mL, n = 100). We measured BMI, 25(OH)D, FBS, HbA1c, fasting insulin, HOMA-IR and lipid profile. APOA1 rs5069 genotypes were determined by TaqMan assays. Group comparisons, Pearson correlation, and multivariate logistic regression (three models with incremental adjustments) were performed.

Vitamin D deficiency (25[OH]D < 20 ng/mL) was common in obese and diabetic groups (p < 0.001). Obese participants with T2DM had the worst metabolic profile (higher FBS, HbA1c, fasting insulin and HOMA-IR; dyslipidemia). The AA genotype and A allele of rs5069 were more frequent in obesity and T2DM than controls (genotype p = 0.005–0.011; allele p = 0.002–0.005). In obese groups, higher 25(OH)D levels were independently associated with lower odds of carrying GA and AA genotypes versus GG after adjustment for glycemic and lipid variables (models 2 and 3). No significant genotype–vitamin D association was observed in non-obese T2DM.

APOA1 rs5069 (AA genotype) is associated with obesity and T2DM in this Egyptian cohort. Higher 25(OH)D was associated with reduced odds of GA/AA genotypes in obese participants, suggesting an interaction between vitamin D status and APOA1-related genetic susceptibility. Further longitudinal and mechanistic studies are needed.

## Linked entities

- **Genes:** APOA1 (apolipoprotein A1) [NCBI Gene 335]
- **Chemicals:** 25-hydroxyvitamin D (PubChem CID 5353325)
- **Diseases:** obesity (MONDO:0011122), type 2 diabetes mellitus (MONDO:0005148)

## Full-text entities

- **Genes:** LCAT (lecithin-cholesterol acyltransferase) [NCBI Gene 3931], VDR (vitamin D receptor) [NCBI Gene 7421] {aka NR1I1, PPP1R163}, LEP (leptin) [NCBI Gene 3952] {aka LEPD, OB, OBS}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, INSR (insulin receptor) [NCBI Gene 3643] {aka CD220, HHF5}, APOB (apolipoprotein B) [NCBI Gene 338] {aka FCHL2, FLDB, LDLCQ4, apoB-100, apoB-48}, ADIPOQ (adiponectin, C1Q and collagen domain containing) [NCBI Gene 9370] {aka ACDC, ACRP30, ADIPQTL1, ADPN, APM-1, APM1}, IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, APOA1 (apolipoprotein A1) [NCBI Gene 335] {aka AMYLD3, HPALP2, apo(a)}, INS (insulin) [NCBI Gene 3630] {aka IDDM, IDDM1, IDDM2, ILPR, IRDN, MODY10}, APOE (apolipoprotein E) [NCBI Gene 348] {aka AD2, APO-E, ApoE4, LDLCQ5, LPG}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, FBRS (fibrosin) [NCBI Gene 64319] {aka FBS, FBS1}
- **Diseases:** 25(OH)D deficiency (MESH:C566945), Diabetes (MESH:D003920), dyslipidemia (MESH:D050171), impaired insulin secretion (MESH:D007333), Vitamin D deficiency (MESH:D014808), Obese (MESH:D009765), T2DM (MESH:D003924), liver or kidney disease (MESH:D008107), hyperglycemia (MESH:D006943), autoimmune or infectious diseases (MESH:D003141), chronic inflammation (MESH:D007249), adiposity (MESH:D018205), myocardial infarction (MESH:D009203), ectopic fat (MESH:D004620), Metabolic abnormalities (MESH:D008659), Weight loss (MESH:D015431), coronary heart disease (MESH:D003327), 25-hydroxyvitamin D deficiency (MESH:C564005)
- **Chemicals:** 25-hydroxyvitamin D (MESH:C104450), calcitriol (MESH:D002117), EDTA (MESH:D004492), triglyceride (MESH:D014280), lipid (MESH:D008055), calcium (MESH:D002118), TG (MESH:D013866), Cholecalciferol (MESH:D002762), 25(OH) D (-), cholesterol (MESH:D002784), Vitamin D (MESH:D014807), glucose (MESH:D005947), blood sugar (MESH:D001786), 7-dehydrocholesterol (MESH:C016705), sodium fluoride (MESH:D012969)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Mutations:** 83 C > T, rs 5069, -75 G> A, 2488 C> T, cytosine-to-thymine

## Full text

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Source: https://tomesphere.com/paper/PMC13013381