# Case Report: A rare presentation of pulmonary tuberculosis with extensive ground-glass opacities in an immunocompetent patient: lessons from metagenomic next-generation sequencing

**Authors:** Juanjuan Mao, Qian Jin, Dan Ye, Yide Yang

PMC · DOI: 10.3389/fmed.2026.1696371 · Frontiers in Medicine · 2026-03-11

## TL;DR

A rare case of tuberculosis in a healthy person with unusual lung scans was diagnosed using advanced genetic testing, leading to successful treatment.

## Contribution

First reported case of atypical tuberculosis in an immunocompetent patient diagnosed using metagenomic next-generation sequencing.

## Key findings

- Extensive ground-glass opacities in CT scans were observed in an immunocompetent patient with pulmonary tuberculosis.
- Metagenomic next-generation sequencing identified Mycobacterium tuberculosis when conventional tests failed.
- Nine months of standard treatment resolved the lung abnormalities confirmed by follow-up imaging.

## Abstract

Pulmonary tuberculosis (PTB) is typically diagnosed through sputum smear microscopy and culture. However, diagnosis is challenging in patients with atypical radiological features and negative conventional tests. Ground-glass opacities (GGOs) are common but non-specific computed tomography (CT) findings and are rarely observed in immunocompetent PTB patients. We report the first case of an immunocompetent 53-year-old female presenting with extensive bilateral GGOs without classic clinical symptoms. Conventional microbiological cultures, acid-fast staining, and serological assays were all negative. Metagenomic next-generation sequencing (mNGS) of bronchoalveolar lavage fluid identified Mycobacterium tuberculosis, further supported by a positive T-spot TB assay. Standard anti-tuberculosis therapy led to complete resolution of GGOs over nine months, confirmed by follow-up CT imaging. This case underscores the diagnostic challenge of atypical PTB presenting with non-classical CT manifestations in an immunocompetent host. It highlights the decisive role of mNGS as a complementary tool in cases where conventional methods fail, enabling timely diagnosis, precise treatment, and improved patient outcomes.

## Linked entities

- **Diseases:** pulmonary tuberculosis (MONDO:0006052)
- **Species:** Mycobacterium tuberculosis (taxon 1773)

## Full-text entities

- **Diseases:** tuberculosis (MESH:D014376), TB (MESH:D014390), GGOs (MESH:C000721427), PTB (MESH:D014397)
- **Species:** Mycobacterium tuberculosis (species) [taxon 1773], Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

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## References

20 references — full list in the complete paper: https://tomesphere.com/paper/PMC13013058/full.md

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Source: https://tomesphere.com/paper/PMC13013058