# Phosphate scarcity governs methane production in the global open ocean

**Authors:** Shengyu Wang, Hairong Xu, Thomas S. Weber

PMC · DOI: 10.1073/pnas.2521235123 · Proceedings of the National Academy of Sciences of the United States of America · 2026-03-17

## TL;DR

Phosphate scarcity in the ocean causes methane production, which could worsen climate change as warming increases.

## Contribution

Phosphate scarcity is identified as the main driver of methane production in the open ocean.

## Key findings

- Methane production is highest in subtropical gyres where phosphate is scarce.
- Future warming could double methane emissions from the ocean.
- Phosphate-limited cleavage of methylphosphonate is the dominant methane production pathway.

## Abstract

Methane is an important climate-warming gas, and its widespread emissions from well-oxygenated surface ocean waters (originally referred to as the “Marine Methane Paradox”) remains poorly understood. Using a global model assessed against field measurements, we evaluate the competing ideas for explaining oxic methane production. We identify phosphate scarcity as the primary environmental control, suggesting that methane is released when phosphate-starved microbes break down organic compounds to meet their phosphorus needs. This process is most active in subtropical ocean regions, where >90% of the methane produced escapes to the atmosphere before it is oxidized. Future climate warming will intensify ocean stratification and phosphate scarcity, likely strengthening this natural methane source to the atmosphere and contributing to amplification of the warming trend.

The observed supersaturation of methane (CH4) in open-ocean surface waters implies widespread CH4 production within the well-oxygenated mixed layer, driving emissions of this potent greenhouse gas to the atmosphere. The dominant CH4 production pathway that explains this phenomenon remains poorly understood, although candidates include production during photosynthesis, zooplankton metabolism, and dissolved organic matter cycling. Here, we construct a data-assimilating model of the open-ocean CH4 cycle to test which hypothesized mechanism is most consistent with the observed global CH4 distribution. We find that only linking methane production to phosphate (PO4) scarcity can explain the observed supersaturation pattern, which is highest in subtropical gyres where PO4 is in short supply. These findings suggest that CH4 release during PO4-limited cleavage of the organic compound methylphosphonate is the dominant production pathway in the open ocean. Because this process is confined to the stratified low latitude surface, it is uniquely suited to efficiently emit the CH4 it produces to the atmosphere (>90%), before the CH4 mixes to depth and undergoes oxidation (<10%). As predicted future ocean warming and stratification exacerbates PO4 scarcity over coming centuries, our model predicts that oxic CH4 production and the resulting CH4 emissions will increase up to twofold, contributing to a suite of positive feedback between climate warming and natural greenhouse gas sources.

## Linked entities

- **Chemicals:** methane (PubChem CID 297), CH4 (PubChem CID 297), methylphosphonate (PubChem CID 14671056), phosphate (PubChem CID 1061)

## Full-text entities

- **Genes:** PRSS27 (serine protease 27) [NCBI Gene 83886] {aka CAPH2, MPN}
- **Chemicals:** DMSP (MESH:C068078), iron (MESH:D007501), methylphosphonate (MESH:C032627), nitrate (MESH:D009566), DOC (-), CH4 (MESH:D008697), PNAS (MESH:D020135), O2 (MESH:D010100), carbon (MESH:D002244), carbon dioxide (MESH:D002245), S (MESH:D013455), DOM (MESH:D000090422), Ac (MESH:D000085), hydrocarbon (MESH:D006838), chlorophyll (MESH:D002734), P (MESH:D010758), water (MESH:D014867), Phosphate (MESH:D010710), Nitrous Oxide (MESH:D009609), organic compounds (MESH:D009930)

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13012047/full.md

## References

70 references — full list in the complete paper: https://tomesphere.com/paper/PMC13012047/full.md

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Source: https://tomesphere.com/paper/PMC13012047