# Examining Epigenetic Age in Women with Different Obesity Conditions Using DNA Methylation at the FHL2 Gene

**Authors:** Licínio Manco, Helena Correia Dias, Lara Palmeira

PMC · DOI: 10.3390/mps9020047 · 2026-03-12

## TL;DR

This study examines how obesity affects the accuracy of DNA methylation-based age prediction in Portuguese women.

## Contribution

The study introduces a novel analysis of epigenetic age prediction accuracy in different obesity classes using the FHL2 gene.

## Key findings

- Severe obesity may reduce the accuracy of DNA methylation-based age estimators.
- Epigenetic age acceleration was observed in younger subjects, while older participants showed deceleration.
- Age prediction models showed higher mean absolute deviation in obesity class 2 compared to other groups.

## Abstract

DNA methylation (DNAm) age estimation is one of the hottest topics in forensic contexts. However, there is growing evidence that DNAm can be affected by several factors, including many clinical conditions. In this study, we analyzed the methylation levels within the FHL2 gene in Portuguese women using the droplet digital PCR (ddPCR) methodology to develop age prediction models (APMs). We hypothesized that obesity could affect the accuracy of APMs and would be associated with the advancement in epigenetic aging. We collected blood samples from 62 women (aged 21–58 years old) with overweight and obesity. DNA extracts were subjected to bisulfite conversion followed by ddPCR using dual-labeled probes targeting the methylated and unmethylated FHL2 CpG site cg06639320. The developed APM yielded a mean absolute deviation (MAD) of 4.72 years between predicted and chronological ages in the total sample. When applying the developed APM to women classified as overweight, the MAD was 3.64 years, while, for those with obesity class 1, it was 3.93 years, and, for those with obesity class 2, 6.29 years. The same pattern of accuracy was observed when we developed APMs specifically for the groups categorized by overweight and obesity, obtaining MAD values of 3.75 years (overweight), 3.69 years (obesity class 1) and 6.24 years (obesity class 2). Our study indicates that severe obesity may impact the accuracy of DNA methylation-based age estimators. We did not find evidence of an association between BMI and accelerated epigenetic aging. However, we found signals of epigenetic age acceleration in younger subjects and epigenetic age deceleration in the older participants.

## Linked entities

- **Genes:** FHL2 (four and a half LIM domains 2) [NCBI Gene 2274]
- **Diseases:** obesity (MONDO:0011122)

## Full-text entities

- **Genes:** FHL2 (four and a half LIM domains 2) [NCBI Gene 2274] {aka AAG11, DRAL, FHL-2, SLIM-3, SLIM3}, SIM1 (SIM bHLH transcription factor 1) [NCBI Gene 6492] {aka bHLHe14}, PDE4C (phosphodiesterase 4C) [NCBI Gene 5143] {aka DPDE1, PDE21}, HHEX (hematopoietically expressed homeobox) [NCBI Gene 3087] {aka HEX, HMPH, HOX11L-PEN, PRH, PRHX}, MC4R (melanocortin 4 receptor) [NCBI Gene 4160] {aka BMIQ20}, KLF14 (KLF transcription factor 14) [NCBI Gene 136259] {aka BTEB5}, TRIM59 (tripartite motif containing 59) [NCBI Gene 286827] {aka IFT80L, MRF1, RNF104, TRIM57, TSBF1}, POMC (proopiomelanocortin) [NCBI Gene 5443] {aka ACTH, CLIP, LPH, MSH, NPP, OBAIRH}, ELOVL2 (ELOVL fatty acid elongase 2) [NCBI Gene 54898] {aka SSC2}
- **Diseases:** MAD (MESH:D010262), APMs (MESH:D004195), injury to (MESH:D014947), Obesity (MESH:D009765), overweight (MESH:D050177)
- **Chemicals:** dUTP (MESH:C027078), Bisulfite (MESH:C042345)
- **Species:** Nicotiana tabacum (American tobacco, species) [taxon 4097], Homo sapiens (human, species) [taxon 9606]

## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13010738/full.md

---
Source: https://tomesphere.com/paper/PMC13010738