# The phytohormone indole-3-acetic acid induces quorum sensing signal DSF turnover via a positive feedback biosynthetic loop in the phytopathogen Xanthomonas campestris

**Authors:** Si-Nan Li, Ming-Lei Zhang, Ying Cui, Lin Li, Chitti Thawai, Lian Jiang, Dong-Lan Tian, Yu-Cheng Gu, Ya-Wen He, Lian Zhou, Kai Song

PMC · DOI: 10.1007/s44154-026-00298-1 · 2026-03-23

## TL;DR

This study shows that the plant hormone IAA helps the bacteria Xanthomonas campestris regulate its communication signals during infection.

## Contribution

The study reveals a new role for IAA in modulating bacterial quorum sensing through a positive feedback loop.

## Key findings

- IAA induces DSF turnover via RpfB-dependent mechanisms.
- IAA upregulates F0F1 ATP synthases and HepABCD to modulate pH-dependent DSF turnover.
- IAA downregulates IaepABCDE to modulate pH-independent DSF turnover.

## Abstract

Indole-3-acetic acid (IAA) accumulates in host plants following infection by Xanthomonas campestris pv. campestris (Xcc), the causal agent of cruciferous black rot. How exposure to IAA affects the invading Xcc remains unclear. Here, we demonstrate that either exogenous addition of IAA or endogenous production of IAA induced turnover of the quorum sensing (QS) signal diffusible signaling factor (DSF) in a RpfB-dependent manner. IAA addition prevented the cytoplasmic and culture pH decline. Transcriptomic analyses revealed four IAA-regulated gene clusters. Specifically, IAA induced the expression of trpB-A, enhancing tryptophan biosynthesis and intracellular IAA accumulation, and thereby establishing a self-reinforcing synthesis loop. IAA upregulated F0F1 ATP synthases and a resistance-nodulation-cell division (RND)-family efflux pump HepABCD to induce a pH-dependent DSF turnover. Moreover, IAA downregulated another RND family efflux pump IaepABCDE to induce a pH-independent DSF turnover. Finally, the IAA-regulated gene clusters were transcribed during the XC1 infection of cabbage. Collectively, these findings reveal a previously unrecognized role of IAA in modulating bacterial QS, underscoring the importance of IAA in the molecular dialogue between the pathogen and its host.

The online version contains supplementary material available at 10.1007/s44154-026-00298-1.

## Linked entities

- **Genes:** rpfB (resuscitation-promoting factor RpfB) [NCBI Gene 886048]
- **Chemicals:** indole-3-acetic acid (PubChem CID 802), IAA (PubChem CID 802)
- **Species:** Xanthomonas campestris pv. campestris (taxon 340), Xanthomonas campestris (taxon 339)

## Full-text entities

- **Genes:** TrpA [NCBI Gene 879479], rnd (ribonuclease D) [NCBI Gene 881579], trpB (tryptophan synthase subunit beta) [NCBI Gene 879212], oprN (multidrug efflux outer membrane protein OprN) [NCBI Gene 882885], TrpI [NCBI Gene 883090]
- **Diseases:** black rot (MESH:D005535), DSF (MESH:C566796), IPTG (MESH:D014808), infection (MESH:D007239), bacterial disease (MESH:D001424), XYS (MESH:C538139), PMF (MESH:D003072), MRM (MESH:D000069076)
- **Chemicals:** ROS (MESH:D017382), proton (MESH:D011522), 4-methylumbelliferyl beta-D-glucuronide (MESH:C034888), K2HPO4 (MESH:C013216), CoA (MESH:D003065), SA (MESH:D020156), acetonitrile (MESH:C032159), Ethyl acetate (MESH:C007650), PBS (MESH:D007854), Na2CO3 (MESH:C005686), carbenicillin (MESH:D002228), methanol (MESH:D000432), His (MESH:D006639), ATP (MESH:D000255), HCl (MESH:D006851), sucrose (MESH:D013395), Kan (MESH:D007612), formic acid (MESH:C030544), argon (MESH:D001128), NaCl (MESH:D012965), IAA (MESH:C030737), Gentamicin (MESH:D005839), water (MESH:D014867), DTT (MESH:D004229), polyacrylamide (MESH:C016679), DSF (-), borate (MESH:D001881), KCl (MESH:D011189), chloroform (MESH:D002725), branched-chain amino acids (MESH:D000597), Triton X-100 (MESH:D017830), auxin (MESH:D007210), fatty acid (MESH:D005227), imidazole (MESH:C029899), acetic acid (MESH:D019342), Rifamycin (MESH:D012294), L-arabinose (MESH:D001089), MgCl2 (MESH:D015636), L-Trp (MESH:D014364), EPS (MESH:C100219), Rif (MESH:C023808), HEPES (MESH:D006531), agar (MESH:D000362), EDTA (MESH:D004492), Cy5 (MESH:C085321), glycerol (MESH:D005990), (NH4)2SO4 (MESH:D000645)
- **Species:** Xanthomonas campestris pv. campestris (no rank) [taxon 340], Variovorax paradoxus (species) [taxon 34073], Chlorococcum humicola (species) [taxon 992351], Pseudomonas aeruginosa (species) [taxon 287], Brassica oleracea var. viridis (collards, varietas) [taxon 3713], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Pseudomonas syringae (species) [taxon 317], Escherichia coli (E. coli, species) [taxon 562], Serratia plymuthica (species) [taxon 82996], Escherichia coli BL21(DE3) (strain) [taxon 469008], Brassica oleracea var. botrytis (cauliflower, varietas) [taxon 3715], Pseudomonas aeruginosa PAO1 (strain) [taxon 208964], Xanthomonas oryzae pv. oryzicola (no rank) [taxon 129394], Oryza sativa (Asian cultivated rice, species) [taxon 4530], Xanthomonas sp. C1 (species) [taxon 495075], Pseudomonas chlororaphis (species) [taxon 587753], Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Agrobacterium tumefaciens (species) [taxon 358], Brassica rapa subsp. pekinensis (bai cai, subspecies) [taxon 51351], Xanthomonas campestris (species) [taxon 339], Raphanus sativus (radish, species) [taxon 3726], Bacillus amyloliquefaciens (species) [taxon 1390], Brassica oleracea (wild cabbage, species) [taxon 3712]
- **Cell lines:** S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232), E. coli BL21(AI — Mus musculus (Mouse), Hybridoma (CVCL_C5QZ), XC1::PatpB — Rattus norvegicus (Rat), Rat sarcoma, Cancer cell line (CVCL_1891), Xcc — Polypedilum vanderplanki (Sleeping chironomid midge), Spontaneously immortalized cell line (CVCL_WH44)

## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13009335/full.md

---
Source: https://tomesphere.com/paper/PMC13009335