# Recombinant Potyvirus lilimaculae in asymptomatic Galanthus nivalis: Ecological and evolutionary implications

**Authors:** János Ágoston, Asztéria Almási, Katalin Salánki, László Palkovics, Adedapo Adediji, Cheorl-Ho Kim, Cheorl-Ho Kim

PMC · DOI: 10.1371/journal.pone.0345337 · PLOS One · 2026-03-23

## TL;DR

A recombinant Potyvirus was found in asymptomatic snowdrops, raising concerns for conservation and horticulture.

## Contribution

The study identifies a recombinant Potyvirus lilimaculae in asymptomatic Galanthus nivalis, expanding its host range and highlighting evolutionary implications.

## Key findings

- The virus was detected in both wild and cultivated snowdrops without visible symptoms.
- Phylogenetic analysis showed the isolates clustered in subgroup II with strong recombination signals.
- Successful infection was confirmed in previously negative snowdrops after sap inoculation.

## Abstract

Snowdrops are economically important early-spring flowering geophytes. They are protected both in Hungary and across the European Union, and their international trade is regulated under the Washington Convention. Despite their importance, virological research on Galanthus species and cultivars remains limited. To date, only a single virus, Snowdrop virus Y, a tentative member of the genus Potyvirus within the family Potyviridae, has been identified in Galanthus. In this study, ten wild leaf samples and one cultivated, asymptomatic leaf samples were collected in accordance with the prescribed permit conditions. Both ELISA and RT-PCR tests were conducted, indicating infection by a Potyvirus. Direct sequencing of the PCR products revealed nucleotide heterogeneity in one sample, suggesting infection with multiple isolates of the same virus. In this case, the purified PCR product was ligated into pGEM®-T Easy vector. Individual clones were then sequenced to identify the distinct viral isolates present. A BLAST analysis of the sequences revealed that all three snowdrop isolates shared at least 96% identity in the complete coat protein region with the Potyvirus lilimaculae (lilí mottle virus, LMoV) isolate Handan (JF714974), previously identified in Narcissus tazetta var. chinensis from Hubei Province, China. To confirm pathogenicity, sap inoculation was performed on ELISA- and RT-PCR-negative snowdrops. One year later, these plants were re-tested via the same methods, which confirmed successful infection. Phylogenetic analysis revealed that all snowdrop isolates clustered within subgroup II and presented strong recombination signals. The detection of LMoV in asymptomatic wild plants has major implications for nature conservation, horticulture, virus reservoir identification, phytosanitary regulation, and our understanding of Potyviridae evolution.

## Linked entities

- **Species:** Galanthus nivalis (taxon 4670)

## Full-text entities

- **Genes:** GOLPH3 (golgi phosphoprotein 3) [NCBI Gene 64083] {aka GOPP1, GPP34, MIDAS, Vps74}, ACHE (acetylcholinesterase (Yt blood group)) [NCBI Gene 43] {aka ACEE, ARACHE, N-ACHE, YT}, CP (ceruloplasmin) [NCBI Gene 1356] {aka AB073614, CP-2}
- **Diseases:** Alzheimer's disease (MESH:D000544), CP (MESH:D058456), COVID-19 (MESH:D000086382), tulip breaking syndrome (MESH:D019457), virus infection (MESH:D014777), infected (MESH:D007239), cancers (MESH:D009369)
- **Chemicals:** alkaloids (MESH:D000470), lycorine (MESH:C015330), water (MESH:D014867), N (MESH:D009584), alanine (MESH:D000409), carborundum (MESH:C517455), agarose (MESH:D012685), polyA (MESH:D011061), EC (-), galantamine (MESH:D005702), CTAB (MESH:D000077286), NAG (MESH:D000117), asparagine (MESH:D001216)
- **Species:** Galanthus nivalis (common snowdrop, species) [taxon 4670], Homo sapiens (human, species) [taxon 9606], Galanthus woronowii (species) [taxon 197699], Galanthus (snowdrops, genus) [taxon 4669], Clover yellow vein virus (no rank) [taxon 12198], Bean yellow mosaic virus (no rank) [taxon 12197], Lilium longiflorum (Easter lily, species) [taxon 4690], Ryegrass mosaic virus (no rank) [taxon 40666], Nepovirus (genus) [taxon 12270], Alstroemeria (genus) [taxon 56741], TSWV [taxon 1933298], Allium cepa var. aggregatum (shallot, varietas) [taxon 28911], Tobacco etch virus (no rank) [taxon 12227], Lily mottle virus (no rank) [taxon 32624], Cichorium endivia (endive, species) [taxon 114280], Potyvirus (genus) [taxon 12195], Galanthus plicatus (species) [taxon 51448], Abelia x grandiflora (glossy abelia, species) [taxon 105883], Acer pseudoplatanus (sycamore maple, species) [taxon 4026], Mus musculus (house mouse, species) [taxon 10090], Anemone coronaria (species) [taxon 167998], Muscari neglectum (species) [taxon 59072], unidentified tobacco necrosis virus (species) [taxon 12054], Narcissus tazetta (species) [taxon 54860], Snowdrop virus Y (no rank) [taxon 555249], Galanthus elwesii (species) [taxon 82232], Narcissus tazetta subsp. chinensis (subspecies) [taxon 391288], Potyviridae (family) [taxon 39729]
- **Mutations:** leucine (L) at aa position 18, aspartic acid (D) to asparagine (N)
- **Cell lines:** E. coli — Mus musculus (Mouse), Hybridoma (CVCL_C5CR), DH5alpha — Drosophila hydei (Fruit fly), Spontaneously immortalized cell line (CVCL_Z531)

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13008102/full.md

## References

138 references — full list in the complete paper: https://tomesphere.com/paper/PMC13008102/full.md

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Source: https://tomesphere.com/paper/PMC13008102