# Stacked-overlapped graphdiyne nano-iontronics enabling enhanced monovalent/divalent cation selectivity for single-cell pH detection

**Authors:** Jin Zhang, Saud Asif Ahmed, Chenxi Wang, Jiayan Liu, Cong Pan, Wenjie Ma, Pengzhan Sun, Ping Yu

PMC · DOI: 10.1093/nsr/nwag050 · National Science Review · 2026-01-24

## TL;DR

A new nano-iontronic device using graphdiyne enables precise, real-time pH measurements at the single-cell level with high cation selectivity.

## Contribution

First single-cell pH sensing with high monovalent/divalent cation selectivity using stacked graphdiyne's sub-nanometer pores and tunable chemistry.

## Key findings

- so-GDY-based pH sensor shows linear ionic current decrease with pH reduction due to protonation of surface functional groups.
- Device exhibits 5x faster transport of monovalent cations compared to divalent cations, with resistance to interference.
- Sensor maintains stability, repeatability, and biocompatibility for single-cell and single-organelle pH detection.

## Abstract

Developing nano-iontronic devices that minimize ionic interference is essential for precise measurements in complex physiological systems. Graphdiyne (GDY), a novel carbon allotrope featuring sub-nanometer pores, enables effective regulation of ionic transport and is therefore a promising material for high-performance iontronic applications. Here, we report a pH-responsive nano-iontronic device fabricated by stacking and overlapping graphdiyne (so-GDY) layers onto the tip of the nanopipette. This so-GDY-based pH nano-iontronic sensor exhibits a linear decrease in ionic current under negative potential as the pH decreases from 8.00 to 5.50. This response is attributed to protonation of the oxygen-containing functional groups on the so-GDY surface and edges, which diminishes the negative surface charge and thereby reduces ionic conductivity. A key advantage of this nano-iontronic device is its excellent selectivity, demonstrating robust resistance to interference from divalent cations (Mg2+, Ca2+) and small molecules within the pH range of 8.00–5.50, while maintaining stable detection currents. The so-GDY-based pH nano-iontronic device transports monovalent cations up to 5 times more rapidly than divalent cations, alongside excellent repeatability, reversibility, and stability. This combination of features yields a biocompatible, high-resolution tool for minimally invasive, real-time pH measurements at the single-cell and even at a single-organelle level, opening new avenues for investigating cellular dynamics and disease pathogenesis with enhanced clarity.

We have for the first time reported a single-cell pH iontronic sensing with high monovalent/divalent cation selectivity by using the sub-nanometer pores and tunable surface chemistry of stacked graphdiyne.

## Linked entities

- **Chemicals:** Mg2+ (PubChem CID 888), Ca2+ (PubChem CID 271)

## Full-text entities

- **Genes:** Slc9a1 (solute carrier family 9 member A1) [NCBI Gene 24782] {aka Nhe1}
- **Diseases:** Cancer (MESH:D009369), hypoxia (MESH:D000860), neuronal death (MESH:D009410), Alzheimer's (MESH:D000544), neurodegenerative diseases (MESH:D019636), mitochondrial dysfunction (MESH:D028361), Parkinson's (MESH:D010300), toxicity (MESH:D064420)
- **Chemicals:** alkyne (MESH:D000480), CuCl (MESH:C028419), penicillin (MESH:D010406), CuCl2 (MESH:C029892), proton (MESH:D011522), Cariporide (MESH:C093373), Na+ (MESH:D012964), Hoechst 33342 (MESH:C017807), water (MESH:D014867), rhodamine 123 (MESH:D020112), ATP (MESH:D000255), Li+ (MESH:D008094), metal (MESH:D008670), R6G (MESH:C026188), CO2 (MESH:D002245), GDY (MESH:C000657226), AgCl (MESH:C037548), HCl (MESH:D006851), KCl (MESH:D011189), lactate (MESH:D019344), C (MESH:D002244), O (MESH:D010100), chloride (MESH:D002712), ethanol (MESH:D000431), DMEM (-), benzene (MESH:D001554), streptomycin (MESH:D013307), CuO (MESH:C030973), 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (MESH:C410687), CaCl2 (MESH:D002122), Ag (MESH:D012834), K+ (MESH:D011188), Cl- (MESH:D002713), MgCl2 (MESH:D015636), PI (MESH:D011419)
- **Cell lines:** SH-SY5Y — Homo sapiens (Human), Neuroblastoma, Cancer cell line (CVCL_0019), PC12 — Rattus norvegicus (Rat), Rat adrenal gland pheochromocytoma, Cancer cell line (CVCL_0481), EPC-10 — Pimephales promelas (Fathead minnow), Spontaneously immortalized cell line (CVCL_4361)

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13007874/full.md

## References

49 references — full list in the complete paper: https://tomesphere.com/paper/PMC13007874/full.md

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Source: https://tomesphere.com/paper/PMC13007874