# Development of CpG‐Depleted CFTR Plasmid‐Based Nanoparticles for Nonviral Gene Therapy in Lung Cystic Fibrosis Disease

**Authors:** Bei Qiu, Maryann Lorino, Yinghao Li, Zhonglei He, Xianqing Wang, Wenxin Wang, Irene Lara‐Sáez

PMC · DOI: 10.1002/jgm.70087 · The Journal of Gene Medicine · 2026-03-23

## TL;DR

Researchers developed a new nonviral gene therapy approach for lung cystic fibrosis using CpG-depleted CFTR plasmid-based nanoparticles to achieve long-lasting protein expression.

## Contribution

A CpG-depleted and codon-optimized CFTR plasmid was developed to enable sustained and high-level CFTR protein expression.

## Key findings

- CpG-depleted CFTR plasmid nanoparticles achieved a 20-fold increase in CFTR protein expression in bronchial epithelial cells.
- The hEFIα promoter outperformed the CMV promoter, showing a 2.26-fold increase in CFTR expression at 7 days post-transfection.
- The plasmid-based approach demonstrated high efficacy in vitro, suggesting potential for in vivo application in cystic fibrosis treatment.

## Abstract

Nonviral gene therapy holds promise as a potential treatment for lung cystic fibrosis (CF). However, the transient expression of the CF transmembrane conductance regulator (CFTR) protein has limited its clinical application. To circumvent this challenge, a CpG‐depleted CFTR plasmid was developed. The CpG‐depleted CFTR plasmid could be compacted into DNA nanoparticles and modified with the addition of highly branched poly(β‐amino ester)s (HPAEs), leading to an improved and sustained CFTR protein expression. Using a CpG‐depleted and codon‐optimized CFTR sequence, around 20‐fold increase in CFTR protein production was achieved 48 h after treatment, compared with healthy human bronchial epithelial cells (16HBE14o‐). To evaluate the duration of CFTR protein expression induced by the plasmid based on human elongation factor 1α (hEFIα) and cytomegalovirus (CMV) promoters, a time course study was conducted in human CF bronchial epithelial (CFBE14o‐) cells. hEFIα promoter revealed a remarkable 2.26‐fold increase in CFTR protein expression at 7 days after transfection compared with 16HBE14o‐ cells. This level of CFTR protein expression outperformed the commonly used CMV promoter. The in vitro results demonstrated that CpG‐depleted CFTR plasmid could be used to achieve high efficacy in subsequent in vivo evaluations, which, if validated, may provide promising prospects for the development of a novel and effective treatment for lung cystic fibrosis.

Well designed CpG‐depleted CFTR nanoparticles for cystic fibrosis.

## Linked entities

- **Genes:** CFTR (CF transmembrane conductance regulator) [NCBI Gene 1080]
- **Proteins:** CFTR (CF transmembrane conductance regulator)
- **Chemicals:** CpG (PubChem CID 145459096)
- **Diseases:** cystic fibrosis (MONDO:0009061)
- **Species:** Homo sapiens (taxon 9606)

## Full-text entities

- **Genes:** CFTR (CF transmembrane conductance regulator) [NCBI Gene 1080] {aka ABC35, ABCC7, CF, CFTR/MRP, MRP7, TNR-CFTR}, FN1 (fibronectin 1) [NCBI Gene 2335] {aka CIG, ED-B, FINC, FN, FNZ, GFND}, Cftr (cystic fibrosis transmembrane conductance regulator) [NCBI Gene 12638] {aka Abcc7}, GAPDH (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 2597] {aka G3PD, GAPD, HEL-S-162eP}, UBC (ubiquitin C) [NCBI Gene 7316] {aka HMG20}, TUBA1B (tubulin alpha 1b) [NCBI Gene 10376] {aka K-ALPHA-1}, EEF1A2 (eukaryotic translation elongation factor 1 alpha 2) [NCBI Gene 1917] {aka DEE33, EEF1AL, EF-1-alpha-2, EF1A, EIEE33, HS1}, YBX1 (Y-box binding protein 1) [NCBI Gene 4904] {aka BP-8, CBF-A, CSDA2, CSDB, DBPB, EFI-A}, TLR9 (toll like receptor 9) [NCBI Gene 54106] {aka CD289}
- **Diseases:** CF (MESH:D003550), cytotoxicity (MESH:D064420), Lung Cystic Fibrosis Disease (MESH:C563237), inflammation (MESH:D007249), lung (MESH:D008171), recessive dystrophic epidermolysis bullosa (MESH:D016108)
- **Chemicals:** polyA (MESH:D011061), MEM (-), Agarose (MESH:D012685), CpG (MESH:C015772), Zeocin (MESH:C105427), streptomycin sulfate (MESH:D013307), glutamine (MESH:D005973), Triton X-100 (MESH:D017830), chloride (MESH:D002712), penicillin (MESH:D010406), OP (MESH:C572232), CO2 (MESH:D002245), DPBS (MESH:C012939), DAPI (MESH:C007293), poly(beta-amino ester) (MESH:C507253), sodium acetate (MESH:D019346), paraformaldehyde (MESH:C003043), Ampicillin (MESH:D000667), S (MESH:D013455), Acetate (MESH:D000085)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Escherichia coli (E. coli, species) [taxon 562], Homo sapiens (human, species) [taxon 9606], Human betaherpesvirus 5 (no rank) [taxon 10359], Cytomegalovirus (genus) [taxon 10358]
- **Mutations:** K978C, Phe508del CFTR, G551D
- **Cell lines:** TOP10 — Homo sapiens (Human), Chronic myelogenous leukemia, BCR-ABL1 positive, Cancer cell line (CVCL_TT29), HPAEs — Homo sapiens (Human), Fibrosarcoma, Cancer cell line (CVCL_3715), 16HBE — Homo sapiens (Human), Transformed cell line (CVCL_0112), hCMV — Mus musculus (Mouse), Hybridoma (CVCL_D147), pOP — Phthorimaea operculella (Potato tuber moth), Spontaneously immortalized cell line (CVCL_Z466), CFBE41o — Homo sapiens (Human), Cystic fibrosis, Transformed cell line (CVCL_HL93), S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232), SCC150 — Homo sapiens (Human), Tongue squamous cell carcinoma, Cancer cell line (CVCL_VJ37), GT115 — Homo sapiens (Human), Spinocerebellar ataxia type 1, Induced pluripotent stem cell (CVCL_ZA12), CFBE14o- — Homo sapiens (Human), Cystic fibrosis, Transformed cell line (CVCL_IN63)

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## References

43 references — full list in the complete paper: https://tomesphere.com/paper/PMC13006820/full.md

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Source: https://tomesphere.com/paper/PMC13006820