# Distinct roles of cortical layer 5 subtypes in associative learning

**Authors:** Sara Moberg, Michele Garibbo, Camille Mazo, Ariel Gilad, Dietmar Schmitz, Rui Ponte Costa, Matthew E. Larkum, Naoya Takahashi

PMC · DOI: 10.1038/s41467-026-68307-5 · Nature Communications · 2026-03-20

## TL;DR

The study shows how two types of neurons in the brain's sensory cortex help learn to connect sensory cues with rewards.

## Contribution

The paper reveals distinct roles of IT and ET neurons in associative learning through in vivo imaging and chemogenetics.

## Key findings

- IT neurons stably encode sensory cues during learning.
- ET neurons dynamically track reward expectations.
- Disrupting either neuron type impairs learning in specific ways.

## Abstract

Adaptive behavior relies on associating sensory cues with rewarding or aversive outcomes. In mammals, the primary sensory cortex processes stimuli and distributes information to cortical and subcortical targets. Layer 5 (L5) contains two major projection neuron classes, intratelencephalic (IT) and extratelencephalic (ET); however, their roles in associative learning remain unclear. Using transgenic mice, we identified IT and ET neurons in primary somatosensory cortex and tracked their activity with longitudinal two-photon imaging during Pavlovian conditioning with whisker stimulation. IT neurons stably encoded stimulus identity across training, whereas ET neurons showed dynamic changes that paralleled the emergence of anticipatory licking. Chemogenetic silencing of each subtype impaired learning in distinct, phase-specific ways. A reinforcement-learning model reproduced these dynamics, suggesting that IT neurons provide stable sensory representations needed to form cue-reward associations, while ET neurons encode reward expectation to refine behavior. These findings reveal complementary, cell-type-specific contributions of L5 neurons to associative learning.

How the brain learns to link a sensory signal to a reward is not fully understood. Here authors show that two types of layer 5 neurons in sensory cortex contribute in different ways, helping the brain recognize relevant sensory cues and refine behavior accordingly.

## Linked entities

- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** RIC8B (RIC8 guanine nucleotide exchange factor B) [NCBI Gene 55188] {aka RIC8, hSyn}, EEF1A2 (eukaryotic translation elongation factor 1 alpha 2) [NCBI Gene 1917] {aka DEE33, EEF1AL, EF-1-alpha-2, EF1A, EIEE33, HS1}, Sim1 (single-minded family bHLH transcription factor 1) [NCBI Gene 20464] {aka bHLHe14, mSIM1}, Tlx3 (T cell leukemia, homeobox 3) [NCBI Gene 27140] {aka Hox11l2, Rnx, Tlx1l2}
- **Diseases:** learning (MESH:D007859)
- **Chemicals:** BODIPY TMR-X (-), muscimol (MESH:D009118), calcium (MESH:D002118), silicone (MESH:D012828), CS (MESH:D002586), PFA (MESH:C003043), DAPI (MESH:C007293), PBS (MESH:D007854), urethane (MESH:D014520), cyanoacrylate (MESH:D003487), isoflurane (MESH:D007530), xylazine (MESH:D014991), CNO (MESH:C079149), dopamine (MESH:D004298), water (MESH:D014867), sucrose (MESH:D013395)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], adeno-associated virus 2 (no rank) [taxon 10804], Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** C57BL/6J — Mus musculus (Mouse), Transformed cell line (CVCL_C0MW)

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13004866/full.md

## References

8 references — full list in the complete paper: https://tomesphere.com/paper/PMC13004866/full.md

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Source: https://tomesphere.com/paper/PMC13004866