# CLDN3 inhibits rotavirus attachment by targeting residue 74 of VP7

**Authors:** Yudi Pan, Jiapei Huang, Longjun Guo, Zixin Li, Hongyan Shi, Yanxiang Zhou, Jianshuang Cui, Hailiang Ge, Li Feng, Jin Tian

PMC · DOI: 10.1371/journal.ppat.1014045 · 2026-03-20

## TL;DR

This study shows how the protein CLDN3 blocks rotavirus from attaching to cells by interacting with a specific part of the virus's VP7 protein.

## Contribution

The study reveals a novel antiviral mechanism where CLDN3 inhibits rotavirus attachment via interaction with VP7 residue E74.

## Key findings

- CLDN3 mislocalization and reduced protein levels during rotavirus infection promote viral binding and entry.
- The CLDN3 EC1 loop interacts with VP7's N-terminal domain, with E74 being critical for this interaction.
- The E74K mutation in VP7 disrupts CLDN3 binding and increases viral pathogenicity in vivo.

## Abstract

Rotavirus (RV) VP8* peptide-induced CLDN3 mislocalization supports the hypothesis that CLDN3 negatively regulates viral binding, while the molecular basis of this inhibitory function remains unresolved. To counteract the CLDN3 defense strategies, RV infection indeed disrupts its localization to the plasma membrane. We also found that RV infection could reduce its protein levels in both in vitro and animal models. Knockdown or knockout of CLDN3 effectively promotes RV binding and entry. Further, we found that CLDN3 EC1 loop could interact with the N-terminal domain of VP7 and structural studies reveal a conserved glutamic acid at position 74 (E74) in VP7 as critical for the CLDN3-VP7 interaction. Mechanistically, VP7 is involved in viral attachment. Binding of the CLDN3 EC1 loop to VP7 reduces viral adsorption, whereas the E74K mutation disrupts the CLDN3-VP7 interaction and consequently enhances viral attachment. More importantly, a single E74K mutation enhances viral pathogenicity in vivo, confirming this interaction’s biological significance. Our results demonstrate for the first time that the tight junction protein CLDN3 acts as a decoy receptor that specifically counters the VP7-mediated viral attachment. This highlights the antiviral mechanisms utilized by CLDN3.

Rotavirus (RV) is a major global pathogen, and understanding the intricate battle between the virus and host defenses is critical. While it is known that RV infection disrupts tight junction proteins like claudins (CLDNs) to facilitate its entry, the specific protective mechanisms of these proteins remain unknown. Our study demonstrated that VP7 glycoprotein is involved in RV adsorption, and CLDN3 as a decoy receptor that directly counters its attachment function. VP7 E74 residue is a key site responsible for association with CLDN3 EC1 loop. The conservation and functional essentiality of the VP7 E74 residue, validated by its profound impact on viral binding and pathogenicity, underscore that VP7 is also an important virulence factor. We elucidate a novel mechanism by which CLDN3 inhibits rotavirus adsorption. This work not only reveals a new front in the host-virus arms race but also identifies a potential target for the development of broad-spectrum antiviral strategies.

## Linked entities

- **Genes:** CLDN3 (claudin 3) [NCBI Gene 1365], VP7 (outer capsid protein) [NCBI Gene 3773131]
- **Proteins:** CLDN3 (claudin 3), VP7 (outer capsid protein), vp8 (nonstructural protein)

## Full-text entities

- **Genes:** Ocln (occludin) [NCBI Gene 18260] {aka Ocl}, CLDN2 (claudin 2) [NCBI Gene 404089], IFNB1 (interferon, beta 1, fibroblast) [NCBI Gene 281845] {aka IFNb}, HSPA8 (heat shock protein family A (Hsp70) member 8) [NCBI Gene 281831] {aka HSPA10, Hsc70}, MYC (MYC proto-oncogene, bHLH transcription factor) [NCBI Gene 511077] {aka CMYC}, OCLN (occludin) [NCBI Gene 397236], mucin [NCBI Gene 100508689], OCLN (occludin) [NCBI Gene 100506658] {aka BLCPMG, PPP1R115, PTORCH1}, NKS1 (natural killer cell susceptibility 1) [NCBI Gene 4819] {aka EC-1, EC1}, HSPA8 (heat shock protein family A (Hsp70) member 8) [NCBI Gene 3312] {aka HEL-33, HEL-S-72p, HSC54, HSC70, HSC71, HSP71}, CLDN3 (claudin 3) [NCBI Gene 404153], CLDN3 (claudin 3) [NCBI Gene 1365] {aka C7orf1, CPE-R2, CPETR2, HRVP1, RVP1}, TJP1 (tight junction protein 1) [NCBI Gene 7082] {aka ZO-1}, CLDN3 (claudin 3) [NCBI Gene 431781], Hal (histidine ammonia lyase) [NCBI Gene 15109] {aka Hsd, his, histidase}, TJP1 (tight junction protein 1) [NCBI Gene 407102] {aka zo1}, CLDN1 (claudin 1) [NCBI Gene 414922], MYC (MYC proto-oncogene, bHLH transcription factor) [NCBI Gene 4609] {aka MRTL, MYCC, bHLHe39, c-Myc}, CLDN5 (claudin 5) [NCBI Gene 617453], IFNA16 (interferon, alpha 16) [NCBI Gene 510726] {aka IFN}, OCLN (occludin) [NCBI Gene 512405], TCF15 (transcription factor 15) [NCBI Gene 6939] {aka EC2, PARAXIS, bHLHa40}, Cldn3 (claudin 3) [NCBI Gene 12739] {aka Cpetr2, mRVP1}, TJP3 (tight junction protein 3) [NCBI Gene 407100] {aka zo3}, Myc (Myc proto-oncogene, bHLH transcription factor) [NCBI Gene 17869] {aka Myc2, Niard, Nird, bHLHe39}, F11R (F11 receptor) [NCBI Gene 281258] {aka JAM1}
- **Diseases:** RVA infection (MESH:D007239), IBD (MESH:D015212), deaths (MESH:D003643), intestinal dysfunction (MESH:D007410), RV infection (MESH:D012400), atrophy (MESH:D001284), viremia (MESH:D014766), respiratory syncytial virus infections (MESH:D018357), cytotoxicity (MESH:D064420), metabolic disorders (MESH:D008659), Weight gain (MESH:D015430), viral infection (MESH:D014777), weight loss (MESH:D015431), ulcerative colitis (MESH:D003093), diarrheal (MESH:D004403), villous atrophy (MESH:C564019), colon carcinoma (MESH:D003110), Diarrhea (MESH:D003967), inflammatory diseases (MESH:D007249), acute gastroenteritis (MESH:D005759), edema (MESH:D004487)
- **Chemicals:** McCoy's 5A medium (MESH:C113109), Ni NTA (-), agarose (MESH:D012685), streptomycin (MESH:D013307), Calcium (MESH:D002118), Lipofectamine 2000 (MESH:C086724), CCK-8 (MESH:D012844), eosin (MESH:D004801), DAPI (MESH:C007293), SDS (MESH:D012967), glycans (MESH:D011134), H2SO4 (MESH:C033158), lipid (MESH:D008055), Alexa Fluor 488 (MESH:C000711379), formalin (MESH:D005557), PBS (MESH:D007854), Na2CO3 (MESH:C005686), sialic acids (MESH:D012794), penicillin (MESH:D010406), carbonate (MESH:D002254), methanol (MESH:D000432), NaHCO3 (MESH:D017693), Tween-20 (MESH:D011136), hematoxylin (MESH:D006416), formic acid (MESH:C030544), 3,3',5,5'-tetramethylbenzidine (MESH:C021758), nitrogen (MESH:D009584), puromycin (MESH:D011691), water (MESH:D014867)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Japanese encephalitis virus (no rank) [taxon 11072], PoRV [taxon 53179], Bovine rotavirus (no rank) [taxon 10927], Porcine rotavirus (no rank) [taxon 10913], Bos taurus (bovine, species) [taxon 9913], Severe acute respiratory syndrome coronavirus 2 (no rank) [taxon 2697049], Norovirus (genus) [taxon 142786], Rotavirus (genus) [taxon 10912], Porcine epidemic diarrhea virus (no rank) [taxon 28295], African swine fever virus (no rank) [taxon 10497], Homo sapiens (human, species) [taxon 9606], Hepatitis delta virus (no rank) [taxon 12475], Rattus norvegicus (brown rat, species) [taxon 10116], hepatitis C virus [taxon 11103], Human rhinovirus sp. (species) [taxon 169066], West Nile virus (no rank) [taxon 11082], Porcine reproductive and respiratory syndrome virus (no rank) [taxon 28344], Transmissible gastroenteritis virus (no rank) [taxon 11149]
- **Mutations:** E74S, 74K, E to K at position 74, P0013C, E74G, E74N, glutamate (E) at residue 74, E74K, E74D, E74, E74, C) for 20, G12P, glutamic acid to lysine
- **Cell lines:** IPEC-J2 — Sus scrofa (Pig), Spontaneously immortalized cell line (CVCL_2246), 293T — Homo sapiens (Human), Transformed cell line (CVCL_0063), 923H — Homo sapiens (Human), Transformed cell line (CVCL_JE16), HT-29 — Homo sapiens (Human), Colon adenocarcinoma, Cancer cell line (CVCL_0320), MA104 — Chlorocebus pygerythrus (Vervet monkey), Spontaneously immortalized cell line (CVCL_3845), Caco-2 — Homo sapiens (Human), Colon adenocarcinoma, Cancer cell line (CVCL_0025), BHK-T7 — Mesocricetus auratus (Golden hamster), Spontaneously immortalized cell line (CVCL_RW96), WI61 — Homo sapiens (Human), Induced pluripotent stem cell (CVCL_C918), 293 — Homo sapiens (Human), Transformed cell line (CVCL_0045), IPEC — Bos taurus (Bovine), Undefined cell line type (CVCL_6C42), SA11 — Mus musculus (Mouse), Malignant neoplasms of the mouse mammary gland, Cancer cell line (CVCL_XC33)

## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13004409/full.md

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Source: https://tomesphere.com/paper/PMC13004409