# Overcoming T cell tolerance to tumor self-antigens through catch-bond engineering

**Authors:** Xiaojing Chen, Zhiyuan Mao, E. Motunrayo Kolawole, Margherita Persechino, Kevin M. Jude, Masato Ogishi, Kelvin C. Mo, Jami McLaughlin, Donghui Cheng, Xinyu Xiang, Xinbo Yang, Caitlin Gee, Shiqin Liu, Aerin Yang, Matthias Obenaus, Nan Wang, Miyako Noguchi, Tanya Stoyanova, John K. Lee, Zinaida Good, Naomi R. Latorraca, Brian D. Evavold, Owen N. Witte, K. Christopher Garcia

PMC · DOI: 10.1126/science.adx3162 · 2026-03-20

## TL;DR

Researchers engineered T cells to better recognize tumor antigens by modifying TCR bonds, improving their ability to fight cancer.

## Contribution

A novel biophysical strategy using catch-bond engineering to enhance TCR function against tumor self-antigens.

## Key findings

- Engineered TCRs showed increased TCR-pMHC bond lifetime and T cell activity.
- Modified T cells exhibited superior tumor expansion and tumor elimination.
- Structural analysis revealed how a single mutation improves TCR-peptide interaction.

## Abstract

T cells are often weakly responsive to tumor self-antigens because of central tolerance, constraining their ability to eliminate tumors. We exploited mechanical force to engineer a weakly reactive TCR specific for a non-mutated tumor associated antigen (TAA), Prostatic Acid Phosphatase (PAP). We identified a catch-bonding “hotspot” whose mutation enhanced T cell activity by increasing TCR-pMHC bond lifetime, whilst preserving physiological affinities and antigen fine-specificities. T cells expressing these engineered TCRs showed vastly superior expansion in the tumor, effector phenotypes and tumor elimination. Crystal structures and molecular dynamics simulations reveal a single amino acid mutation at the catch bond hotspot primes the TCR for peptide interaction through water reorganization at the TCR-pMHC interface. Catch bond engineering is a viable biophysically-based strategy for transforming tolerized anti-tumor T cells into potent TCR-T killers.

## Linked entities

- **Proteins:** Tcr (Third chromosome alpha methyl dopa-resistant), MYH15 (myosin, heavy chain 15)

## Full-text entities

- **Genes:** TOX (thymocyte selection associated high mobility group box) [NCBI Gene 9760] {aka TOX1}, TOP2A (DNA topoisomerase II alpha) [NCBI Gene 7153] {aka TOP2, TOP2alpha, TOPIIA, TP2A}, IFIT3 (interferon induced protein with tetratricopeptide repeats 3) [NCBI Gene 3437] {aka CIG-49, GARG-49, IFI60, IFIT4, IRG2, ISG60}, MYB (MYB proto-oncogene, transcription factor) [NCBI Gene 4602] {aka Cmyb, c-myb, c-myb_CDS, efg}, N4BP2 (NEDD4 binding protein 2) [NCBI Gene 55728] {aka B3BP}, TRBV20OR9-2 (T cell receptor beta variable 20/OR9-2 (non-functional)) [NCBI Gene 6962] {aka CDR3, TCRBV20S2, TCRBV2O, TCRBV2S2O}, NEDD4 (NEDD4 E3 ubiquitin protein ligase) [NCBI Gene 4734] {aka NEDD4-1, RPF1}, GZMA (granzyme A) [NCBI Gene 3001] {aka CTLA3, HFSP}, Trav6-3 (T cell receptor alpha variable 6-3) [NCBI Gene 328483] {aka Gm13948, Gm193, Gm4, TCR}, GZMB (granzyme B) [NCBI Gene 3002] {aka C11, CCPI, CGL-1, CGL1, CSP-B, CSPB}, MAGEA4 (MAGE family member A4) [NCBI Gene 4103] {aka CT1.4, MAGE-41, MAGE-X2, MAGE4, MAGE4A, MAGE4B}, LAMP1 (lysosome associated membrane protein 1) [NCBI Gene 3916] {aka CD107a, LAMPA, LGP120}, Cd4 (CD4 antigen) [NCBI Gene 12504] {aka L3T4, Ly-4}, IFNA1 (interferon alpha 1) [NCBI Gene 3439] {aka IFL, IFN, IFN-ALPHA, IFN-alphaD, IFNA13, IFNA@}, CCR7 (C-C motif chemokine receptor 7) [NCBI Gene 1236] {aka BLR2, CC-CKR-7, CCR-7, CD197, CDw197, CMKBR7}, TRAJ60 (T cell receptor alpha joining 60 (pseudogene)) [NCBI Gene 28695] {aka TCRA}, Acp3 (acid phosphatase 3) [NCBI Gene 56318] {aka 5'-NT, A030005E02Rik, Acpp, FRAP, Lap, PAP}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, Mlana (melan-A) [NCBI Gene 77836] {aka A930034P04Rik, Mart1}, NGFR (nerve growth factor receptor) [NCBI Gene 4804] {aka CD271, Gp80-LNGFR, TNFRSF16, p75(NTR), p75NTR}, IFIT1 (interferon induced protein with tetratricopeptide repeats 1) [NCBI Gene 3434] {aka C56, G10P1, IFI-56, IFI-56K, IFI56, IFIT-1}, HLA-C (major histocompatibility complex, class I, C) [NCBI Gene 3107] {aka D6S204, HLA-JY3, HLAC, HLC-C, MHC, PSORS1}, PAPA2 (postaxial polydactyly, type A2) [NCBI Gene 8103], LAG3 (lymphocyte activating 3) [NCBI Gene 3902] {aka CD223}, PAPOLA (poly(A) polymerase alpha) [NCBI Gene 10914] {aka PAP, PAP-alpha}, HAVCR2 (hepatitis A virus cellular receptor 2) [NCBI Gene 84868] {aka CD366, HAVcr-2, KIM-3, SPTCL, TIM3, TIMD-3}, PRF1 (perforin 1) [NCBI Gene 5551] {aka HPLH2, P1, PFP}, CD69 (CD69 molecule) [NCBI Gene 969] {aka AIM, BL-AC/P26, CLEC2C, EA1, GP32/28, MLR-3}, IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}, GZMH (granzyme H) [NCBI Gene 2999] {aka CCP-X, CGL-2, CSP-C, CTLA1, CTSGL2}, CD19 (CD19 molecule) [NCBI Gene 930] {aka B4, CVID3}, RNF112 (ring finger protein 112) [NCBI Gene 7732] {aka BFP, ZNF179}, GNLY (granulysin) [NCBI Gene 10578] {aka D2S69E, LAG-2, LAG2, NKG5, TLA519}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, IL7R (interleukin 7 receptor) [NCBI Gene 3575] {aka CD127, CDW127, IL-7R-alpha, IL-7Ralpha, IL7RA, IL7Ralpha}, ACP3 (acid phosphatase 3) [NCBI Gene 55] {aka 5'-NT, ACP-3, ACPP, TM-PAP}, MAGEA1 (MAGE family member A1) [NCBI Gene 4100] {aka CT1.1, MAGE1}, MAGEA3 (MAGE family member A3) [NCBI Gene 4102] {aka CT1.3, HIP8, HYPD, MAGE3}, LEF1 (lymphoid enhancer binding factor 1) [NCBI Gene 51176] {aka ECTD1, ECTD17, LEF-1, TCF10, TCF1ALPHA, TCF7L3}, PTPRC (protein tyrosine phosphatase receptor type C) [NCBI Gene 5788] {aka B220, CD45, CD45R, GP180, IMD105, L-CA}, ISG15 (ISG15 ubiquitin like modifier) [NCBI Gene 9636] {aka G1P2, IFI15, IMD38, IP17, UCRP, hUCRP}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}
- **Diseases:** synovial sarcoma (MESH:D013584), B cell malignancies (MESH:D016393), inflammatory (MESH:D007249), melanoma (MESH:D008545), glioblastoma (MESH:D005909), cancer (MESH:D009369), cytotoxic (MESH:D064420), T cell dysfunction (MESH:C536780), PAP+ (MESH:D011472), prostate cancer (MESH:D011471)
- **Chemicals:** sulfur (MESH:D013455), Histidine (MESH:D006639), water (MESH:D014867), N (MESH:D009584), Glutamic acid (MESH:D018698), E (MESH:D004540), amino acid (MESH:D000596), Asparagine (MESH:D001216), alanine (MESH:D000409), H (MESH:D006859), P4 (MESH:C015586), CARv3 (-), T (MESH:D014316), methionine (MESH:D008715)
- **Species:** Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090]
- **Mutations:** E at position 30, S32, S32H, G55N/H, Ser at position 4, Met32, R28Q, Ser30, Gln32, Ser30Glu, His/Asn, Ser4 substitution to Ala, S32Q, Asn at position 8, Q61K, R96H, H32, S32M
- **Cell lines:** PAP22 — Homo sapiens (Human), Glioblastoma, Cancer cell line (CVCL_B1CW), PC3 — Homo sapiens (Human), Prostate carcinoma, Cancer cell line (CVCL_0035), K562 — Homo sapiens (Human), Blast phase chronic myelogenous leukemia, BCR-ABL1 positive, Cancer cell line (CVCL_0004), PC3-A2-PAP — Homo sapiens (Human), Transformed cell line (CVCL_B1AN), SKW-3 — Homo sapiens (Human), Adult T acute lymphoblastic leukemia, Cancer cell line (CVCL_2197), TCR156 T — Homo sapiens (Human), Tongue squamous cell carcinoma, Cancer cell line (CVCL_VJ39), HEK-T — Homo sapiens (Human), Transformed cell line (CVCL_0063)

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13004167/full.md

---
Source: https://tomesphere.com/paper/PMC13004167