# CRISPR-enhanced microalgae biosynthesis: a promising approach for future functional feed ingredients

**Authors:** Zhen Li, Cong Li, Huan Liu, Yihao Wang, Yahui Sun, De-Xing Hou, Jianhua He, Shusong Wu

PMC · DOI: 10.1186/s40104-026-01367-1 · 2026-03-20

## TL;DR

This paper explores how CRISPR technology can boost microalgae's ability to produce valuable nutrients for animal feed.

## Contribution

The paper highlights CRISPR-based genome editing as a novel strategy to enhance microalgae biosynthesis for functional feed ingredients.

## Key findings

- CRISPR can optimize microalgae nutritional profiles for livestock.
- Microalgae can produce high-value bioactive compounds like proteins and fatty acids.
- Synthetic biology strategies are key to scaling up microalgae-derived product production.

## Abstract

Microalgae are photosynthetic microorganisms capable of synthesizing diverse high-value bioactive compounds, including premium proteins, polyunsaturated fatty acids, pigments, and vitamins. These natural products exhibit significant potential in enhancing livestock growth and health, offering biological activity and nutritional benefits that surpass chemically synthesized alternatives. Nevertheless, the commercial production of microalgae-derived natural products remains insufficient to meet escalating market demands. Utilizing synthetic biology strategies, especially the CRISPR system, to increase productivity of microalgae cell factories is crucial for scaling up high-value product biosynthesis. This article reviews the current applications, construction strategies, and critical pathway nodes in microalgae cell factory, with emphasis on CRISPR-based genome editing breakthroughs for optimizing microalgae nutritional profiles, and recent progress in microalgae utilization for livestock production, providing a forward-looking perspective on future developments.

## Full-text entities

- **Genes:** PHYTOENE SYNTHASE [NCBI Gene 5726776], glyceraldehyde-3-phosphate dehydrogenase [NCBI Gene 5715019], LCY-E [NCBI Gene 5721910], 1-Deoxy-D-xylulose 5-phosphate reductoisomerase [NCBI Gene 5719579], phosphoenolpyruvate carboxylase [NCBI Gene 5721430], Carotenoid isomerase [NCBI Gene 5723787], beta-Carotene ketolase [NCBI Gene 5724273], Phytoene desaturase [NCBI Gene 5716547], glycerol-3-phosphate acyltransferase [NCBI Gene 5720456], geranylgeranyl reductase [NCBI Gene 5715748], Fea1 [NCBI Gene 5719589], zeta-Carotene desaturase [NCBI Gene 5726519], ferredoxin [NCBI Gene 5716653], Glutamyl-tRNA reductase [NCBI Gene 5717992], CHYB [NCBI Gene 5724272]
- **Diseases:** weight gain (MESH:D015430), diarrhea (MESH:D003967), pigmentation (MESH:D010859), HL (MESH:C538324), toxicity (MESH:D064420), ALE (MESH:D007757)
- **Chemicals:** magnesium (MESH:D008274), astaxanthin (MESH:C005948), theophylline (MESH:D013806), Docosahexaenoic acid (MESH:D004281), PUFAs (MESH:D005231), lysine (MESH:D008239), Geranylgeranyl pyrophosphate (MESH:C002963), oil (MESH:D009821), n-3 PUFA (MESH:D015525), Polyethylene glycol (MESH:D011092), 2-C-Methyl-D-erythritol 4-phosphate (MESH:C114232), lutein (MESH:D014975), phenol (MESH:D019800), ammonia (MESH:D000641), porphyrin (MESH:D011166), Eicosapentaenoic acid (MESH:D015118), EMS (MESH:D005020), CO2 (MESH:D002245), alpha-linolenic acid (MESH:D017962), P (MESH:D010758), chlorophyll (MESH:D002734), nitrosoguanidine (MESH:D009604), N (MESH:D009584), IPP (MESH:C041272), 5-aminolevulinic acid (MESH:C000614854), heme (MESH:D006418), methane (MESH:D008697), GC (MESH:C057580), 1-Deoxy-D-xylulose 5-phosphate (MESH:C109460), fucoxanthin (MESH:C025164), ARTP (-), Glyceraldehyde 3-phosphate (MESH:D005986), MEP (MESH:C064603), carbon (MESH:D002244), methionine (MESH:D008715), fatty acid (MESH:D005227), terpenoid (MESH:D013729), ethanol (MESH:D000431), 60Co (MESH:C000615395), MNNG (MESH:D008769), iron (MESH:D007501), TPP (MESH:D013835), tetrapyrrole (MESH:D045725), DHA (MESH:C027493), beta-carotene (MESH:D019207), carotenoid (MESH:D002338), DMAPP (MESH:C043060), zeaxanthin (MESH:D065146), triacylglycerols (MESH:D014280), K (MESH:D011188), Isopentenyl pyrophosphate (MESH:C004809), lipid (MESH:D008055), essential amino acids (MESH:D000601), polysaccharides (MESH:D011134), starch (MESH:D013213), NADPH (MESH:D009249)
- **Species:** Tetraselmis sp. (species) [taxon 2812566], Tetradesmus obliquus (species) [taxon 3088], Haematococcus lacustris (species) [taxon 44745], Scenedesmus sp. (species) [taxon 2909984], Fistulifera solaris (species) [taxon 1519565], Porphyridium sp. (species) [taxon 77580], Synechococcus sp. (species) [taxon 1131], Microchloropsis salina (species) [taxon 2511165], Prototheca moriformis (species) [taxon 183676], Chlorella vulgaris (species) [taxon 3077], Sus scrofa (pig, species) [taxon 9823], Escherichia coli (E. coli, species) [taxon 562], Auxenochlorella pyrenoidosa (species) [taxon 3078], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], PX clade (clade) [taxon 569578], Scenedesmus acutus (species) [taxon 104103], Dunaliella salina (species) [taxon 3046], Chlorella sorokiniana (species) [taxon 3076], Microcystis aeruginosa (species) [taxon 1126], Bos taurus (bovine, species) [taxon 9913], Nannochloropsis oceanica (species) [taxon 145522], Dunaliella sp. (species) [taxon 109970], Synechococcus elongatus PCC 7942 = FACHB-805 (strain) [taxon 1140], Phaeodactylum sp. (species) [taxon 2170316], Chlorella sp. (species) [taxon 3079], Schizochytrium sp. (species) [taxon 1907177], Nannochloropsis gaditana (species) [taxon 72520], Glycine max (soybean, species) [taxon 3847], Chlamydomonas reinhardtii (species) [taxon 3055], Limnospira platensis (species) [taxon 118562], Euglena gracilis (species) [taxon 3039], Phaeodactylum tricornutum (species) [taxon 2850], Synechocystis sp. (species) [taxon 1143], Bacillus cereus (species) [taxon 1396]
- **Cell lines:** PCC 6803 — Homo sapiens (Human), Transformed cell line (CVCL_A6SD), HX- — Homo sapiens (Human), Fibrosarcoma, Cancer cell line (CVCL_3318)

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13003683/full.md

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Source: https://tomesphere.com/paper/PMC13003683