# Innate immune recognition and evasion strategies of hepatitis B virus: from DNA to RNA and viral proteins

**Authors:** Zhenghao Chen, Rui Hu, Huajun Ye, Qiuxun Chen, Yuhang Liu, Xinyu Zhang, Yingting Chen, You Wu, Ciliang Jin

PMC · DOI: 10.3389/fimmu.2026.1741620 · 2026-03-03

## TL;DR

This paper reviews how the hepatitis B virus evades the body's innate immune system and suggests new therapeutic strategies to combat it.

## Contribution

The paper provides a comprehensive synthesis of HBV immune evasion mechanisms and proposes novel combinatorial therapeutic approaches.

## Key findings

- HBV DNA and RNA are sensed by PRRs, but the virus employs strategies to evade detection.
- HBV proteins like HBsAg and HBx interfere with interferon signaling pathways.
- New therapeutic strategies include PRR agonists and disruption of the HBx–DDB1 axis.

## Abstract

Innate immunity constrains the hepatitis B virus (HBV) by sensing pathogen-associated molecular patterns (PAMPs) and inducing type I/III interferons and interferon-stimulated genes. This review synthesizes molecular mechanisms by which HBV nucleic acids and proteins are detected by pattern recognition receptors (PRRs) and how the virus evades such surveillance. At the DNA level, covalently closed circular DNA (cccDNA) persists as a chromatin-like episome with low immunogenicity; cGAS–STING signaling is functionally dampened, whereas nuclear interferon-inducible protein 16(IFI16) and cytoplasmic/nuclear ABCF1 bind cccDNA to repress transcription, and APOBEC3A-mediated deamination requires robust interferon signaling. At the RNA level, TLR3/7/8 and retinoic acid-inducible Gene I(RIG-I) sense circulating HBV RNA and 5′-triphosphate pregenomic RNA, respectively. HBV counteracts RIG-I-like receptor (RLR) pathways through ADAR1 editing, TIAR-dependent translational control, and a metabolic checkpoint involving lactate-MAVS/hexokinase, whereas spliced viral RNAs (svRNAs) have emerged as immunologically relevant species. At the protein level, Hepatitis B Surface Antigen (HBsAg) impairs interferons (IFN) induction by blocking the TAK1–TAB2–NF-κB/IRF axis; Hepatitis B Virus X Protein (HBx) sustains cccDNA transcription via DDB1-directed Smc5/6 degradation and broadly suppresses PRR/IFN signaling, with TRIM25 acting as a host restriction factor. These insights nominate combinatorial strategies—PRR agonists (TLR/STING), MAVS sensitization, metabolic disinhibition, pharmacological disruption of the HBx–DDB1 axis, and reinforcement of IFI16/ABCF1—to achieve functional control of cccDNA and advance curative hepatitis B virus (HBV) therapy.

## Linked entities

- **Genes:** CGAS (cyclic GMP-AMP synthase) [NCBI Gene 115004], STING1 (stimulator of interferon response cGAMP interactor 1) [NCBI Gene 340061], IFI16 (interferon gamma inducible protein 16) [NCBI Gene 3428], ABCF1 (ATP binding cassette subfamily F member 1) [NCBI Gene 23], APOBEC3A (apolipoprotein B mRNA editing enzyme catalytic subunit 3A) [NCBI Gene 200315], TLR3 (toll like receptor 3) [NCBI Gene 7098], TLR7 (toll like receptor 7) [NCBI Gene 51284], TLR8 (toll like receptor 8) [NCBI Gene 51311], RIGI (RNA sensor RIG-I) [NCBI Gene 23586], MAP3K7 (mitogen-activated protein kinase kinase kinase 7) [NCBI Gene 6885], TAB2 (TGF-beta activated kinase 1 (MAP3K7) binding protein 2) [NCBI Gene 23118], NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790], TRIM63 (tripartite motif containing 63) [NCBI Gene 84676], DDB1 (damage specific DNA binding protein 1) [NCBI Gene 1642], TRIM25 (tripartite motif containing 25) [NCBI Gene 7706]

## Full-text entities

- **Genes:** APOBEC3A (apolipoprotein B mRNA editing enzyme catalytic subunit 3A) [NCBI Gene 200315] {aka A3A, ARP3, PHRBN, bK150C2.1}, TIAL1 (TIA1 cytotoxic granule associated RNA binding protein like 1) [NCBI Gene 7073] {aka TCBP, TIAR}, DDB1 (damage specific DNA binding protein 1) [NCBI Gene 1642] {aka DDBA, UV-DDB1, WHIKERS, XAP1, XPCE, XPE}, TRIM63 (tripartite motif containing 63) [NCBI Gene 84676] {aka CMH31, IRF, MURF1, MURF2, RNF28, SMRZ}, ABCF1 (ATP binding cassette subfamily F member 1) [NCBI Gene 23] {aka ABC27, ABC50}, RIGI (RNA sensor RIG-I) [NCBI Gene 23586] {aka DDX58, RIG-I, RIG1, RLR-1, SGMRT2}, CGAS (cyclic GMP-AMP synthase) [NCBI Gene 115004] {aka C6orf150, D4, MB21D1, h-cGAS}, DHX58 (DExH-box helicase 58) [NCBI Gene 79132] {aka D11LGP2, D11lgp2e, LGP2, RLR-3}, STING1 (stimulator of interferon response cGAMP interactor 1) [NCBI Gene 340061] {aka ERIS, MITA, MPYS, NET23, SAVI, STING}, TRIM25 (tripartite motif containing 25) [NCBI Gene 7706] {aka EFP, RNF147, Z147, ZNF147}, HBx [NCBI Gene 944566], IFI16 (interferon gamma inducible protein 16) [NCBI Gene 3428] {aka IFNGIP1, PYHIN2}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, MAVS (mitochondrial antiviral signaling protein) [NCBI Gene 57506] {aka CARDIF, IPS-1, IPS1, VISA}, NR1I2 (nuclear receptor subfamily 1 group I member 2) [NCBI Gene 8856] {aka BXR, ONR1, PAR, PAR1, PAR2, PARq}, TAB2 (TGF-beta activated kinase 1 (MAP3K7) binding protein 2) [NCBI Gene 23118] {aka CHTD2, MAP3K7IP2, TAB-2}, HK1 (hexokinase 1) [NCBI Gene 3098] {aka CNSHA5, HK, HK1-ta, HK1-tb, HK1-tc, HKD}, MAP3K7 (mitogen-activated protein kinase kinase kinase 7) [NCBI Gene 6885] {aka CSCF, FMD2, MEKK7, TAK1, TGF1a}, ADAR (adenosine deaminase RNA specific) [NCBI Gene 103] {aka ADAR1, AGS6, DRADA, DSH, DSRAD, G1P1}
- **Chemicals:** lactate (MESH:D019344)
- **Species:** Hepatitis B virus (no rank) [taxon 10407]

## Figures

1 figure with captions in the complete paper: https://tomesphere.com/paper/PMC13003344/full.md

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Source: https://tomesphere.com/paper/PMC13003344