# Cancer Metabolism and Its Historical & Molecular Foundations: An Overview

**Authors:** Rami A. Al-Horani

PMC · DOI: 10.3390/ddc5010017 · Drugs and drug candidates · 2026-03-20

## TL;DR

This paper reviews how cancer cells rewire their metabolism to support tumor growth and suggests new strategies for targeting these changes.

## Contribution

The paper introduces a unifying framework for cancer metabolism involving metabolic plasticity, oncometabolite-driven epigenetic remodeling, and immune-metabolic crosstalk.

## Key findings

- Cancer metabolism involves more than glycolysis, including glutamine metabolism and lipid synthesis.
- Metabolic reprogramming is driven by oncogenes, tumor suppressor genes, and the tumor microenvironment.
- Emerging strategies like metabolic inhibitors and immuno-metabolic combinations show promise for precision cancer treatment.

## Abstract

Cancer metabolism is a cornerstone of tumor biology, characterized by profound alterations in cellular energy production and biosynthetic pathways that drive malignancy. The seminal discovery of the “Warburg effect”, the preference of cancer cells for aerobic glycolysis even under oxygen-rich conditions, provided the first major insight into this field. Historically, this observation was attributed to defective mitochondria, but modern research has revealed a far more complex picture of metabolic reprogramming that is actively driven by oncogenes, tumor suppressor genes, and the tumor microenvironment (TME). This review advances a unifying framework for understanding cancer metabolism as a dynamic ecosystem defined by three interconnected adaptations: metabolic plasticity, oncometabolite-driven epigenetic remodeling, and immune-metabolic crosstalk. These adaptations extend beyond glycolysis to encompass glutamine metabolism, lipid synthesis, amino acid utilization, and mitochondrial dynamics, all coordinated to fuel rapid proliferation, promote survival, and enable metastasis. By examining the drivers, consequences, and therapeutic barriers within this framework, we highlight emerging strategies for precision intervention. Although understanding the mechanistic basis of these pathways has unveiled new therapeutic avenues, clinical translation has been limited by metabolic redundancy, microenvironmental buffering, and patient heterogeneity. Strategies such as metabolic inhibitors, dietary interventions, and immuno-metabolic combinations offer promising prospects for disrupting tumor growth when guided by biomarker-driven patient selection and emerging technologies, including spatial metabolomics and AI-driven network modeling.

## Linked entities

- **Diseases:** cancer (MONDO:0004992)

## Full-text entities

- **Genes:** FH (fumarate hydratase) [NCBI Gene 2271] {aka FMRD, HLRCC, HsFH, LRCC, MCL, MCUL1}, CPT1A (carnitine palmitoyltransferase 1A) [NCBI Gene 1374] {aka CPT I, CPT1, CPT1-L, CPTI-L, L-CPT1}, IDH1 (isocitrate dehydrogenase (NADP(+)) 1) [NCBI Gene 3417] {aka HEL-216, HEL-S-26, IDCD, IDH, IDP, IDPC}, EPAS1 (endothelial PAS domain protein 1) [NCBI Gene 2034] {aka ECYT4, HIF2A, HLF, MOP2, PASD2, bHLHe73}, HIF1A (hypoxia inducible factor 1 subunit alpha) [NCBI Gene 3091] {aka HIF-1-alpha, HIF-1A, HIF-1alpha, HIF1, HIF1-ALPHA, MOP1}, LDHA (lactate dehydrogenase A) [NCBI Gene 3939] {aka GSD11, HEL-S-133P, LDHM, PIG19}, TP53 (tumor protein p53) [NCBI Gene 7157] {aka BCC7, BMFS5, LFS1, P53, TRP53}, SCD (stearoyl-CoA desaturase) [NCBI Gene 6319] {aka FADS5, MSTP008, SCD1, SCDOS, hSCD1}, PDK1 (pyruvate dehydrogenase kinase 1) [NCBI Gene 5163], ERBB2 (erb-b2 receptor tyrosine kinase 2) [NCBI Gene 2064] {aka CD340, HER-2, HER-2/neu, HER2, MLN 19, MLN-19}, KEAP1 (kelch like ECH associated protein 1) [NCBI Gene 9817] {aka INrf2, KLHL19}, BCL2 (BCL2 apoptosis regulator) [NCBI Gene 596] {aka Bcl-2, PPP1R50}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, SLC7A5 (solute carrier family 7 member 5) [NCBI Gene 8140] {aka 4F2LC, CD98, D16S469E, E16, LAT1, MPE16}, KRAS (KRAS proto-oncogene, GTPase) [NCBI Gene 3845] {aka 'C-K-RAS, C-K-RAS, CFC2, K-RAS2A, K-RAS2B, K-RAS4A}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, SLC2A1 (solute carrier family 2 member 1) [NCBI Gene 6513] {aka CSE, DYT17, DYT18, DYT9, EIG12, GLUT}, PFKFB3 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3) [NCBI Gene 5209] {aka IPFK2, PFK2, iPFK-2}, FASN (fatty acid synthase) [NCBI Gene 2194] {aka FAS, OA-519, SDR27X1}, VEGFA (vascular endothelial growth factor A) [NCBI Gene 7422] {aka L-VEGF, MVCD1, VEGF, VPF}, PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 5291] {aka P110BETA, PI3K, PI3KBETA, PIK3C1}, GLS (glutaminase) [NCBI Gene 2744] {aka AAD20, CASGID, DEE71, EIEE71, GAC, GAM}, VHL (von Hippel-Lindau tumor suppressor) [NCBI Gene 7428] {aka HRCA1, RCA1, VHL1, pVHL}, SLC1A5 (solute carrier family 1 member 5) [NCBI Gene 6510] {aka AAAT, ASCT2, ATBO, M7V1, M7VS1, R16}, ARG1 (arginase 1) [NCBI Gene 383], PRKAA1 (protein kinase AMP-activated catalytic subunit alpha 1) [NCBI Gene 5562] {aka AMPK, AMPK alpha 1, AMPKa1}, INS (insulin) [NCBI Gene 3630] {aka IDDM, IDDM1, IDDM2, ILPR, IRDN, MODY10}, FLT3 (fms related receptor tyrosine kinase 3) [NCBI Gene 2322] {aka CD135, FLK-2, FLK2, STK1}, IDH2 (isocitrate dehydrogenase (NADP(+)) 2) [NCBI Gene 3418] {aka D2HGA2, ICD-M, IDH, IDH-2, IDHM, IDP}, SLC3A2 (solute carrier family 3 member 2) [NCBI Gene 6520] {aka 4F2, 4F2HC, 4T2HC, CD98, CD98HC, MDU1}, STK11 (serine/threonine kinase 11) [NCBI Gene 6794] {aka LKB1, PJS, hLKB1}, IDO1 (indoleamine 2,3-dioxygenase 1) [NCBI Gene 3620] {aka IDO, IDO-1, INDO}, NAMPT (nicotinamide phosphoribosyltransferase) [NCBI Gene 10135] {aka 1110035O14Rik, PBEF, PBEF1, VF, VISFATIN}, HK2 (hexokinase 2) [NCBI Gene 3099] {aka HKII, HXK2}, MYC (MYC proto-oncogene, bHLH transcription factor) [NCBI Gene 4609] {aka MRTL, MYCC, bHLHe39, c-Myc}, SDHB (succinate dehydrogenase complex iron sulfur subunit B) [NCBI Gene 6390] {aka CWS2, IP, MC2DN4, PGL4, PPGL4, SDH}, SLC16A1 (solute carrier family 16 member 1) [NCBI Gene 6566] {aka HHF7, MCT, MCT1, MCT1D}, NFE2L2 (NFE2 like bZIP transcription factor 2) [NCBI Gene 4780] {aka IMDDHH, NRF2, Nrf-2}, MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 2475] {aka FRAP, FRAP1, FRAP2, RAFT1, RAPT1, SKS}
- **Diseases:** mitochondrial (MESH:D028361), Pancreatic cancers (MESH:D010190), Toxicity (MESH:D064420), NSCLC (MESH:D002289), renal cancer (MESH:D007680), astrocytoma (MESH:D001254), castration (MESH:D064129), arginine (MESH:C567192), prostate cancer (MESH:D011471), metastases (MESH:D009362), paragangliomas (MESH:D010235), AML (MESH:D015470), tumorigenesis (MESH:D063646), renal and lung cancers (MESH:D008175), leukemias (MESH:D007938), von Hippel-Lindau (MESH:D006623), oncogenes (MESH:D000074723), cholangiocarcinoma (MESH:D018281), PDAC (MESH:D021441), BTC (MESH:D001661), injury to (MESH:D014947), Burkitt lymphoma (MESH:D002051), small cell lung cancer (MESH:D055752), chondrosarcoma (MESH:D002813), glutamine addiction (MESH:C536832), hematologic malignancies (MESH:D019337), pheochromocytomas (MESH:D010673), Hypoxic (MESH:D002534), Breast and prostate cancers (MESH:D001943), infectious diseases (MESH:D003141), Clear cell renal cell carcinoma (MESH:D002292), glioblastoma (MESH:D005909), hypoxia (MESH:D000860), clear cell sarcoma (MESH:D018227), Tumor (MESH:D009369), positive (MESH:D000377), lung adenocarcinoma (MESH:D000077192), T-cell lymphomas (MESH:D016399), gliomas (MESH:D005910), melanoma (MESH:D008545), neuroblastoma (MESH:D009447), SDH deficiency (MESH:C565375)
- **Chemicals:** fumarate (MESH:D005650), gilteritinib (MESH:C000609080), Pentose phosphate (MESH:D010428), Nivolumab (MESH:D000077594), Lipid (MESH:D008055), NADPH (MESH:D009249), Tryptophan (MESH:D014364), etomoxir (MESH:C054207), malonyl-CoA (MESH:D008316), platinum (MESH:D010984), Arginine (MESH:D001120), Lactate (MESH:D019344), azacitidine (MESH:D001374), Fatty acid (MESH:D005227), carbon (MESH:D002244), TCA (MESH:D014233), oxygen (MESH:D010100), JPH-203 (MESH:C548172), Denifanstat (MESH:C000717092), Glutamine (MESH:D005973), Talazoparib (MESH:C586365), acid (MESH:D000143), 2-HG (MESH:C019417), BCAAs (MESH:D000597), soraphen A (MESH:C086151), 2-DG (MESH:D003847), CB-839 (MESH:C000593334), Enasidenib (MESH:C000605269), CPI-613 (MESH:C568850), monounsaturated fatty acids (MESH:D005229), FOLFIRINOX (MESH:C000627770), DX2-201 (-), cholesterol (MESH:D002784), syrosingopine (MESH:C084824), Serine (MESH:D012694), glycine (MESH:D005998), AZD3965 (MESH:C000592351), venetoclax (MESH:C579720), cytarabine (MESH:D003561), pembrolizumab (MESH:C582435), urea (MESH:D014508), nitrogen (MESH:D009584), Glucose (MESH:D005947), nucleotide (MESH:D009711), KMH-233 (MESH:C000619638), acetate (MESH:D000085), everolimus (MESH:D000068338), IACS-010759 (MESH:C000710313), S-adenosylmethionine (MESH:D012436), kynurenine (MESH:D007737), ammonia (MESH:D000641), Ivosidenib (MESH:C000627630), pyruvate (MESH:D019289), glucose-6-phosphate (MESH:D019298), Acetyl-CoA (MESH:D000105), ATP (MESH:D000255), ND-646 (MESH:C000621677), BAY-876 (MESH:C000620175), metformin (MESH:D008687), fructose-2,6-bisphosphate (MESH:C027652)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Mutations:** glutamine to glutamate, serine/glycine, G12C

## Full text

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## Figures

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## References

194 references — full list in the complete paper: https://tomesphere.com/paper/PMC13002032/full.md

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Source: https://tomesphere.com/paper/PMC13002032