# Characterization of a unique phosphopantetheinyl transferase (PPTase) in the fish pathogen Pseudomonas plecoglossicida

**Authors:** Yu Chi, Tingting Jia, Jigang Chen, Zhijuan Mao

PMC · DOI: 10.1371/journal.pone.0345063 · PLOS One · 2026-03-19

## TL;DR

This study investigates a unique enzyme in a fish pathogen, revealing its role in bacterial survival and virulence.

## Contribution

The paper is the first to characterize the function and virulence significance of PPTase in Pseudomonas plecoglossicida.

## Key findings

- The PPTase mutant showed reduced growth, increased sensitivity to stress, and lower virulence in host fish.
- RNA-seq analysis revealed 179 differentially expressed genes linked to iron transport, stress response, and secretion systems.
- The PPTase enzyme is essential for fatty acid synthesis and pathogenicity in P. plecoglossicida.

## Abstract

Phosphopantetheinyl transferase (PPTase) is a key enzyme that catalyzes 4’-phosphopantetheinylation at conserved serine residues of fatty acid synthases, polyketide synthases, and nonribosomal peptide synthetases. It is involved in the biosynthesis of primary and secondary metabolites and has been well characterized as an important virulence factor in many pathogenic microorganisms. A unique Sfp-type PPTase was annotated in Pseudomonas plecoglossicida NB2011, the causative agent of visceral granulomas syndrome in the large yellow croaker (Larimichthys crocea). However, the biological function and virulence significance of this enzyme in the pathogen have not yet been studied. In this paper, we aligned the target sequence with other Sfp-type PPTases, constructed a deletion mutant using the method of double homologous recombination, investigated the biological phenotypes, and compared the intracellular survival and virulence of the mutant and wild-type strains. Additionally, we performed RNA-seq and analyzed the transcription data. The results indicated that the PPTase of P. plecoglossicida shares the highest sequence similarity with PapcpS of P. aeruginosa. A conditional mutant was successfully constructed when pET22b-entD was present. Compared to the wild-type strain, the mutant was lysine indispensable, exhibited poorer growth during the late log phase, was more sensitive to H2O2 exposure, displayed lower siderophore activity, and exhibited a significant reduction in total fatty acid synthesis. Furthermore, fewer bacterial cells of the mutant persisted in mouse macrophage J774A.1, and its toxicity to the host fish was substantially attenuated. RNA-seq analysis revealed 179 differentially expressed genes (DEGs), including 105 up-regulated and 74 down-regulated genes. Genes involved in iron transportation, oxidative stress response, and ABC transporters were down-regulated, while genes in the type III and type VI secretion systems were predominantly up-regulated. The transcriptomic results are consistent with the phenotypic observations, suggesting that the PPTase is essential for bacterial survival and plays important roles in the pathogenicity process. This is the first paper on the PPTase from P. plecoglossicida.

## Linked entities

- **Genes:** entD (4'-phosphopantetheinyl transferase entD) [NCBI Gene 916981]
- **Chemicals:** H2O2 (PubChem CID 784)
- **Species:** Pseudomonas plecoglossicida (taxon 70775), Larimichthys crocea (taxon 215358)

## Full-text entities

- **Diseases:** granulomas (MESH:D006099), cytotoxicity (MESH:D064420), ND (MESH:C537849), infected (MESH:D007239)
- **Chemicals:** piperazine (MESH:D000077489), water (MESH:D014867), gentamicin (MESH:D005839), TRIzol (MESH:C411644), agar (MESH:D000362), H2SO4 (MESH:C033158), enterobactin (MESH:D004758), sodium acetate (MESH:D019346), kanamycin (MESH:D007612), iron (MESH:D007501), sucrose (MESH:D013395), HCl (MESH:D006851), catechol (MESH:C034221), sulfanilic acid (MESH:D013425), sodium arsenite (MESH:C017947), n-3 polyunsaturated fatty acid (MESH:D015525), Fatty acid (MESH:D005227), trisodium citrate (MESH:C514290), H2O2 (MESH:D006861), hexadecyltrimethylammonium (MESH:D000077286), Triton X-100 (MESH:D017830), PBS (MESH:D007854), amino acids (MESH:D000596), BD (MESH:C028491), Pyoverdine (MESH:C042453), succinate (MESH:D019802), iodine (MESH:D007455), alpha-naphthylamine (MESH:D015057), CH3COONa (-), Lysine (MESH:D008239), phosphate (MESH:D010710), unsaturated fatty acids (MESH:D005231), erythromycin (MESH:D004917)
- **Species:** Escherichia coli BL21(DE3) (strain) [taxon 469008], Pseudomonas plecoglossicida NB2011 (strain) [taxon 1330531], Edwardsiella tarda (species) [taxon 636], Bacillus cereus (species) [taxon 1396], Pseudomonas plecoglossicida (species) [taxon 70775], Mycobacterium tuberculosis (species) [taxon 1773], Escherichia coli (E. coli, species) [taxon 562], Larimichthys crocea (croceine croaker, species) [taxon 215358], Bacillus subtilis (species) [taxon 1423], Colletotrichum graminicola (species) [taxon 31870], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Fusarium fujikuroi (species) [taxon 5127], Bipolaris sorokiniana (species) [taxon 45130], Streptococcus mutans (species) [taxon 1309], Escherichia coli DH5[alpha] (strain) [taxon 668369], Pseudomonas aeruginosa (species) [taxon 287], Mus musculus (house mouse, species) [taxon 10090], Zymoseptoria tritici (species) [taxon 1047171], Pseudomonas aeruginosa PAO1 (strain) [taxon 208964]
- **Mutations:** M13R, M13F
- **Cell lines:** WM3064 — Homo sapiens (Human), Melanoma, Cancer cell line (CVCL_C281), pET22b — Mus musculus (Mouse), Adenoma of the mouse pulmonary system, Cancer cell line (CVCL_5U98), DH5alphaand — Drosophila hydei (Fruit fly), Spontaneously immortalized cell line (CVCL_Z531), J774A.1 — Mus musculus (Mouse), Mouse reticulum cell sarcoma, Cancer cell line (CVCL_0358), NB2011 — Homo sapiens (Human), Transformed cell line (CVCL_K772)

## Full text

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## Figures

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## References

41 references — full list in the complete paper: https://tomesphere.com/paper/PMC13001928/full.md

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Source: https://tomesphere.com/paper/PMC13001928