# Harnessing evolution: leveraging bacterial isoprenoid pathway diversity toward improved bioengineering strategies

**Authors:** Christine M. Qabar, Bailey A. Marshall, Robert Landick, Jeffery S. Cox

PMC · DOI: 10.1128/jb.00441-25 · Journal of Bacteriology · 2026-02-17

## TL;DR

This paper explores how bacteria use different isoprenoid pathways, revealing diversity that could help engineer microbes for sustainable production of valuable compounds.

## Contribution

The study highlights rare bacteria with unique isoprenoid pathway configurations and their potential for bioengineering.

## Key findings

- Bacteria show significant diversity in isoprenoid pathway usage across and within genera.
- Some bacteria encode both or neither isoprenoid pathway, suggesting novel evolutionary adaptations.
- MEP intermediates may have roles beyond isoprenoid synthesis, influencing pathway evolution.

## Abstract

Isoprenoids play vital roles in all domains of life, from beta-carotene in bacteria to heme in humans. Two distinct metabolic pathways have evolved to synthesize the critical precursor of all mature isoprenoids: the mevalonate (MEV) and the methylerythritol phosphate (MEP) pathways. Here, we quantify the extensive inter- and intra-genus heterogeneity in the usage of these two pathways with particular emphasis on rare bacteria that encode both, or neither, pathways. Furthermore, MEP intermediates themselves have non-isoprenogenic roles that may underlie evolutionary pressures driving pathway diversification. Understanding isoprenoid biosynthesis in bacteria offers new avenues toward more sustainable engineering of economically relevant molecules in microbes.

## Linked entities

- **Chemicals:** beta-carotene (PubChem CID 5280489), heme (PubChem CID 4973)

## Full-text entities

- **Chemicals:** beta-carotene (MESH:D019207), MEP (-), heme (MESH:D006418), Isoprenoids (MESH:D013729), MEV (MESH:D008798)
- **Species:** Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13001223/full.md

## References

127 references — full list in the complete paper: https://tomesphere.com/paper/PMC13001223/full.md

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Source: https://tomesphere.com/paper/PMC13001223