# The FOXA transcription factors in allergic airway disease and asthma

**Authors:** Diana C. Yánez, Ching-In Lau, Jasmine Rowell, Eden Zhang, Tessa Crompton

PMC · DOI: 10.3389/falgy.2026.1770114 · 2026-03-05

## TL;DR

This paper reviews how FOXA transcription factors influence allergic asthma by regulating inflammation and airway health.

## Contribution

The paper highlights new insights into how FOXA proteins modulate allergic inflammation and epithelial homeostasis in asthma.

## Key findings

- FOXA2 suppresses Th2 differentiation and mucus overproduction in healthy airways.
- FOXA3 is induced by Th2 cytokines during allergic inflammation.
- Dysregulation of FOXA factors contributes to airway remodeling in asthma.

## Abstract

The Forkhead box A (FOXA) transcription factors are pioneer factors that orchestrate diverse cellular and developmental processes. Within the respiratory system, FOXA1, FOXA2, and FOXA3 have emerged as modulators of pulmonary inflammation, with important implications for the pathogenesis of allergic asthma. In healthy lung and airways, FOXA1 and FOXA2 maintain epithelial integrity and promote ciliated cell development, thereby preserving homeostasis. FOXA2 additionally suppresses Th2 differentiation and goblet cell metaplasia and mucus overproduction. During allergic airway inflammation, FOXA2 expression is decreased and FOXA3 expression is induced by Th2 cytokines. Dysregulation of the FOXA regulatory network disrupts epithelial cell homeostasis and amplifies allergic inflammation, contributing to airway remodelling. Here we will review the potential mechanisms through which the FOXA family modulates airway inflammation, while also addressing gaps in current understanding, such as the context specific regulation of FOXA isoforms, their interplay with cytokine signalling pathways, and the translational relevance of these findings to therapeutic strategies in asthma.

## Linked entities

- **Genes:** FOXA1 (forkhead box A1) [NCBI Gene 3169], FOXA2 (forkhead box A2) [NCBI Gene 3170], FOXA3 (forkhead box A3) [NCBI Gene 3171]
- **Diseases:** allergic asthma (MONDO:0004784), asthma (MONDO:0004979)

## Full-text entities

- **Genes:** FOXA3 (forkhead box A3) [NCBI Gene 3171] {aka FKHH3, HNF3G, TCF3G}, FOXA1 (forkhead box A1) [NCBI Gene 3169] {aka HNF3A, TCF3A}, FOXA2 (forkhead box A2) [NCBI Gene 3170] {aka HNF-3-beta, HNF3B, TCF3B}
- **Diseases:** pulmonary inflammation (MESH:D011014), allergic airway disease (MESH:D004342), allergic airway inflammation (MESH:D007249), asthma (MESH:D001249)

## Figures

1 figure with captions in the complete paper: https://tomesphere.com/paper/PMC12999953/full.md

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Source: https://tomesphere.com/paper/PMC12999953