# Spatial transcriptomic profiling identifies lacrimal-gland-epithelial cell-driven mechanisms underlying autoimmunity in Sjögren’s disease

**Authors:** Shivali Gupta, Athanasios Ploumakis, Nikolaos Kalavros, Sharmila Masli

PMC · DOI: 10.3389/fimmu.2026.1759347 · 2026-03-05

## TL;DR

This study uses spatial transcriptomics to uncover how specific cell types in the lacrimal gland contribute to autoimmune damage in Sjögren’s disease.

## Contribution

The study identifies novel epithelial cell-driven mechanisms and spatial interactions in Sjögren’s disease lacrimal glands using spatial transcriptomics.

## Key findings

- Acinar cells show endoplasmic reticulum stress and reduced Pigr expression, correlating with lower tear IgA levels.
- Ductal epithelial cells exhibit mitochondrial dysfunction and interact with immune cells to drive inflammation.
- Myoepithelial cells show contractile impairment and profibrotic remodeling, contributing to glandular damage.

## Abstract

Sjögren’s disease (SjD) is the second most prevalent rheumatic disease and is characterized by autoimmune pathology targeting the tear-producing lacrimal glands, leading to chronic ocular surface disease. Despite important advances, lacrimal gland pathology in SjD remains incompletely understood, limiting both diagnosis and treatment.

In this exploratory study, we used spatial transcriptomics to profile lacrimal glands from wild-type (C57Bl/6) mice and thrombospondin-1-deficient (TSP-1-/-) mice, a spontaneous model of SjD, to identify molecular signatures associated with the functional loss of major epithelial cell subtypes—acinar, ductal, and myoepithelial cells.

Our analyses revealed gene expression patterns consistent with endoplasmic reticulum stress in acinar cells, mitochondrial dysfunction in ductal epithelial cells, secretory dysfunction in both acinar and ductal epithelial cells, and contractile impairment with profibrotic remodeling in myoepithelial cells in SjD lacrimal glands, highlighting potential early mechanisms and markers of glandular damage. Furthermore, in acinar epithelial cells, a significantly reduced expression of Pigr, which encodes the polymeric immunoglobulin receptor required for the transcytotic delivery of protective secretory IgA into tear fluid, correlated with reduced tear secretory IgA levels in SjD mice, consistent with their observed ocular surface disease.

This finding supports the potential use of tear sIgA as a quantifiable biomarker of glandular dysfunction. By integrating spatial and cellular information, we uncovered a previously unrecognized spatial relationship between ductal epithelial cells and antigen-presenting cells in the lacrimal gland and identified a potential role for ductal epithelial cells as active drivers of inflammation by providing molecular and cellular cues that support periductal infiltrates rich in B cells and T follicular helper cells that form germinal centers and promote local autoantibody production. These findings together generate testable mechanistic hypotheses for each epithelial subtype and propose a framework for the therapeutic targeting of epithelial cells and multicellular interactions that underlie autoimmune lacrimal gland pathology in SjD.

## Linked entities

- **Genes:** PIGR (polymeric immunoglobulin receptor) [NCBI Gene 5284]
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Thbs1 (thrombospondin 1) [NCBI Gene 21825] {aka TSP-1, TSP1, Thbs-1, tbsp1}, Pigr (polymeric immunoglobulin receptor) [NCBI Gene 18703], Tsp1 (tumor suppressor region 1) [NCBI Gene 108314] {aka MTS}
- **Diseases:** ocular surface disease (MESH:D010534), rheumatic disease (MESH:D012216), chronic ocular surface disease (MESH:D002908), autoimmune lacrimal gland pathology (MESH:C562407), inflammation (MESH:D007249), mitochondrial dysfunction (MESH:D028361), SjD (MESH:D012859)
- **Species:** Mus musculus (house mouse, species) [taxon 10090]

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12999407/full.md

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Source: https://tomesphere.com/paper/PMC12999407