# Formation of a reducing microenvironment and regulation of protein supersulfidation by gut microbial supersulfides

**Authors:** Jun Uchiyama, Yoshimi Shimizu, Takamitsu Unoki, Shingo Kasamatsu, Tomoaki Ida, Hideshi Ihara, Yun-Gi Kim, Koji Hase, Yuri Miura, Tomohiko Maehama, Maiko Kusano, Keitaro Umezawa, Masahiro Akiyama

PMC · DOI: 10.1016/j.redox.2026.104123 · 2026-03-11

## TL;DR

This study shows that gut bacteria produce supersulfides, which help create a protective environment and modify proteins to regulate bacterial functions.

## Contribution

The study reveals the dual role of microbial supersulfides in shaping the gut redox environment and modulating protein function through supersulfidation.

## Key findings

- Bacterial supersulfides enhance extracellular reducing capacity, especially in Dorea longicatena and Enterocloster bolteae.
- Supersulfidation of proteins varies by species and affects core microbial processes like bile acid metabolism.
- Lactobacillaceae family members are particularly sensitive to exogenous supersulfides.

## Abstract

Supersulfides, sulfur species containing catenated sulfur atoms, are potent reducing agents produced by diverse organisms. Although their intracellular functions are increasingly recognized, the ecological and physiological importance of gut microbial supersulfides remains poorly understood. In this study, we explored two complementary aspects of gut microbiota-derived supersulfide. First, by assessing the reducing activity, we found that bacterial supersulfides contribute to the enhancement of the extracellular reducing capacity. In particular, Dorea longicatena and Enterocloster bolteae exhibit strong cystine-dependent supersulfide production, which is associated with protection against oxidative stress. Second, beyond their ecological roles, supersulfides influence protein supersulfidation, which is a reversible post-translational modification. Supersulfidated proteins have been detected across multiple commensal taxa with species-specific profiles. This modification is redox-sensitive and modulated by extracellular supersulfides. Members of the Lactobacillaceae family are particularly susceptible to exogenous supersulfides. Supersulfidation involves proteins linked to core microbial processes, including bile acid metabolism, suggesting their potential role in tuning bacterial functions. Together, these findings suggest that microbial supersulfides act as dual regulators: (i) contributing to a protective reducing milieu and (ii) modulating bacterial protein function through supersulfidation. By highlighting post-translational control in gut bacteria and their sensitivity to the local redox environment, this work broadens the current models of microbial redox biology and provides a basis for linking bacterial sulfur metabolism with gut ecosystem stability and host-microbe interactions.

Image 1

•Gut bacterial supersulfides contribute to the intestinal reducing environment.•Bacteria belonging to Lachnospiraceae family exhibit cystine-dependent reducing activity.•A reducing environment protects bacteria from oxidative stress.•Supersulfidated protein profiles vary among bacterial species, contributing to functional regulation.

Gut bacterial supersulfides contribute to the intestinal reducing environment.

Bacteria belonging to Lachnospiraceae family exhibit cystine-dependent reducing activity.

A reducing environment protects bacteria from oxidative stress.

Supersulfidated protein profiles vary among bacterial species, contributing to functional regulation.

## Linked entities

- **Chemicals:** cystine (PubChem CID 67678)
- **Species:** Dorea longicatena (taxon 88431), Enterocloster bolteae (taxon 208479), Lactobacillaceae (taxon 33958)

## Full-text entities

- **Genes:** CTH (cystathionine gamma-lyase) [NCBI Gene 1491] {aka CGL, CSE}, CBS (cystathionine beta-synthase) [NCBI Gene 875] {aka HIP4}, MPST (mercaptopyruvate sulfurtransferase) [NCBI Gene 4357] {aka MST, TST2, TUM1}
- **Chemicals:** S (MESH:D013455), ampicillin (MESH:D000667), kanamycin (MESH:D007612), sodium acetate (MESH:D019346), SDS (MESH:D012967), D-PBS (MESH:C012939), IAA (MESH:D007460), Cholic acid (MESH:D019826), N-ethylmaleimide (MESH:D005033), short-chain fatty acids (MESH:D005232), zirconia (MESH:C028541), H2O (MESH:D014867), silica (MESH:D012822), DTT (MESH:D004229), glycerol (MESH:D005990), BSH (MESH:C014651), TCEP (MESH:C080938), FA (MESH:C030544), tryptophan (MESH:D014364), Na2S (MESH:C033479), HEPES (MESH:D006531), l-tyrosine (MESH:D014443), nitrogen (MESH:D009584), NaCl (MESH:D012965), beta-(4-hydroxyphenyl)ethyl iodoacetamide (MESH:C418302), sodium deoxycholate (MESH:D003840), 3-aminopyridyl-N-hydroxysuccinimidyl carbamate (MESH:C542836), 5,5'-dithiobis-(2-nitrobenzoic acid (MESH:D004228), TFA (MESH:D014269), H2S (MESH:D006862), 2-mercaptoethanol (MESH:D008623), phosphate (MESH:D010710), Cys-S-AM-HPE (-), ammonium bicarbonate (MESH:C027043), WST-8 (MESH:C476329), sulfane (MESH:C000712687), reactive nitrogen species (MESH:D026361), Cystine (MESH:D003553), luminal (MESH:D010634), reactive oxygen species (MESH:D017382), oxygen (MESH:D010100), H2O2 (MESH:D006861), vancomycin (MESH:D014640), bicine (MESH:C027494), Triton X-100 (MESH:D017830), imidazole (MESH:C029899), methanol (MESH:D000432), IGEPAL CA-630 (MESH:C010615), thiol (MESH:D013438), chloroform (MESH:D002725), glycocholic acid (MESH:D006000), cysteine (MESH:D003545), disulfide (MESH:D004220), PBS (MESH:D007854), bile acid (MESH:D001647), IPTG (MESH:D007544), amino acid (MESH:D000596)
- **Species:** Dorea longicatena (species) [taxon 88431], Limosilactobacillus reuteri (species) [taxon 1598], Homo sapiens (human, species) [taxon 9606], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Bacteroides thetaiotaomicron (species) [taxon 818], Ligilactobacillus murinus (species) [taxon 1622], Pseudoflavonifractor capillosus (species) [taxon 106588], Mus musculus (house mouse, species) [taxon 10090], Escherichia coli K-12 (strain) [taxon 83333], Bacteroides ovatus (species) [taxon 28116]
- **Cell lines:** S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232), BL21(DE3) — Mus musculus (Mouse), Hybridoma (CVCL_B7HM), /6 — Homo sapiens (Human), Tongue squamous cell carcinoma, Cancer cell line (CVCL_5985), E. coli DH5alpha — Drosophila hydei (Fruit fly), Spontaneously immortalized cell line (CVCL_Z531)

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12999317/full.md

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Source: https://tomesphere.com/paper/PMC12999317