# Mitochondrial impairment and mTORC1 signalling exhaustion define NK Cell dysfunction progression in melanoma

**Authors:** Eimear Mylod, Jack Behan, Dina Baier, Fergal C. Kelleher, Clair M. Gardiner

PMC · DOI: 10.1007/s00262-026-04323-0 · Cancer Immunology, Immunotherapy : CII · 2026-03-17

## TL;DR

This study shows that NK cells in melanoma patients become increasingly dysfunctional as the cancer progresses, with mitochondrial and signaling issues that could be targeted for therapy.

## Contribution

The study reveals progressive metabolic and functional impairment of NK cells in melanoma and identifies a potential therapeutic window in early stages.

## Key findings

- Stage III melanoma patient NK cells show reduced mitochondrial mass and impaired cytotoxicity.
- Stage IV patients exhibit severe mitochondrial fragmentation and reduced cytokine responsiveness.
- Pharmacologic mTORC1 activation rescues IFN-γ production in Stage III but not Stage IV NK cells.

## Abstract

Cutaneous melanoma is a highly metastatic cancer which had limited treatment options until the advent of immune checkpoint inhibitors (ICI); however, only around 50% of patients respond. Natural killer (NK) cells are potent cytotoxic and cytokine producing lymphocytes which present a promising avenue for immunotherapy. However, the progressive dysfunction of NK cells during cancer development represents a major barrier to effective autologous therapies. This study investigated the metabolic and functional plasticity of circulating NK cells during melanoma progression from Stage III lymph node positive and Stage IV metastatic melanoma. Stage III patient NK cells displayed reduced mitochondrial mass, fragmented morphology and dysregulated mTORC1 activity, accompanied by impaired cytotoxicity. Stage IV patients showed severe mitochondrial fragmentation, altered mTORC1 activation and markedly reduced cytokine responsiveness. Pharmacologic restoration of mTORC1 activity using MHY1485 rescued IFN-y production in Stage III but not Stage IV patient NK cells, suggesting stage-dependent differences in metabolic responsiveness. Collectively, these findings indicate progressive metabolic and functional impairment of circulating NK cells as melanoma advances and highlight a potential window for therapeutic intervention earlier in disease progression.

The online version of this article (10.1007/s00262-026-04323-0) contains supplementary material, which is available to authorized users.

## Linked entities

- **Proteins:** Crtc (CREB-regulated transcription coactivator)
- **Chemicals:** MHY1485 (PubChem CID 2834965)
- **Diseases:** melanoma (MONDO:0005105)

## Full-text entities

- **Genes:** TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, SLC3A2 (solute carrier family 3 member 2) [NCBI Gene 6520] {aka 4F2, 4F2HC, 4T2HC, CD98, CD98HC, MDU1}, CXADRP1 (CXADR pseudogene 1) [NCBI Gene 653108] {aka CAR, CXADRP}, ATP5F1B (ATP synthase F1 subunit beta) [NCBI Gene 506] {aka ATP5B, ATPMB, ATPSB, DYT38, HEL-S-271, HUMOP2}, LAMP1 (lysosome associated membrane protein 1) [NCBI Gene 3916] {aka CD107a, LAMPA, LGP120}, IL12B (interleukin 12B) [NCBI Gene 3593] {aka CLMF, CLMF2, IL-12B, IMD28, IMD29, NKSF}, MYC (MYC proto-oncogene, bHLH transcription factor) [NCBI Gene 4609] {aka MRTL, MYCC, bHLHe39, c-Myc}, TAS2R63P (taste 2 receptor member 63, pseudogene) [NCBI Gene 338413] {aka PS6, T2R63}, CD69 (CD69 molecule) [NCBI Gene 969] {aka AIM, BL-AC/P26, CLEC2C, EA1, GP32/28, MLR-3}, IL2RA (interleukin 2 receptor subunit alpha) [NCBI Gene 3559] {aka CD25, IDDM10, IL2R, IMD41, TCGFR, p55}, IL2RB (interleukin 2 receptor subunit beta) [NCBI Gene 3560] {aka CD122, IL15RB, IMD63, P70-75}, APC (APC regulator of Wnt signaling pathway) [NCBI Gene 324] {aka BTPS2, DESMD, DP2, DP2.5, DP3, GS}, TFRC (transferrin receptor) [NCBI Gene 7037] {aka CD71, IMD46, T9, TFR, TFR1, TR}, IL15 (interleukin 15) [NCBI Gene 3600] {aka IL-15}, GZMB (granzyme B) [NCBI Gene 3002] {aka C11, CCPI, CGL-1, CGL1, CSP-B, CSPB}, NCAM1 (neural cell adhesion molecule 1) [NCBI Gene 4684] {aka CD56, MSK39, NCAM}, IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}, SLTM (SAFB like transcription modulator) [NCBI Gene 79811] {aka Met}, TNFSF10 (TNF superfamily member 10) [NCBI Gene 8743] {aka APO2L, Apo-2L, CD253, TANCR, TL2, TNLG6A}
- **Diseases:** LN+ disease (MESH:D004194), Cutaneous melanoma (MESH:C562393), obesity (MESH:D009765), cancer (MESH:D009369), metabolic dysregulation (MESH:D021081), mitochondrial fragmentation (MESH:D012892), III (MESH:C537189), neuroblastoma (MESH:D009447), lymph (MESH:D000072717), metabolic dysfunction (MESH:D008659), HIV (MESH:D015658), Stage IV melanoma (MESH:D008545), HD (MESH:D000067329), Mitochondrial impairment (MESH:D028361), Mitochondrial defects (MESH:C565376), NK cell dysfunction (MESH:D000077428), IV (MESH:D006011), Stage III (MESH:D062706), cytotoxicity (MESH:D064420), breast and liver cancer (MESH:D001943)
- **Chemicals:** penicillin (MESH:D010406), oil (MESH:D009821), superoxide (MESH:D013481), MitoTEMPO (MESH:C555916), BD (MESH:C028491), PBS (MESH:D007854), acid (MESH:D000143), amino acid (MESH:D000596), streptomycin (MESH:D013307), FCCP (MESH:D002259), AF488 (-), MitoSOX (MESH:C521281), Oligomycin (MESH:D009840), Rotenone (MESH:D012402), tetramethylrhodamine methyl ester (MESH:C401833), paraformaldehyde (MESH:C003043), iron (MESH:D007501), DAPI (MESH:C007293), brefeldin A (MESH:D020126), MHY1485 (MESH:C577756), ATP (MESH:D000255)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Mutations:** BRAFV600K, C with 100, BRAFV600E
- **Cell lines:** SH1-26E7.1.3 — Mus musculus (Mouse), Hybridoma (CVCL_KT07)

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12996465/full.md

## References

8 references — full list in the complete paper: https://tomesphere.com/paper/PMC12996465/full.md

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Source: https://tomesphere.com/paper/PMC12996465