# Case Report: Molecular diagnostics and clinical courses of two adult spinal pilocytic astrocytoma long-term survivors with GTF2I::BRAF fusion

**Authors:** Lorenzo Argao, Pinar E. Zerk, Hsiang-Chih Lu, Zied Abdullaev, Martha Quezado, Michelle L. Cassidy, Bennett Mclver, Anna Choi, Marissa Panzer, Renee Tweneboah-Koduah, Lily Polskin, Marta Penas-Prado, Paul Park, Nathan Clarke, Kenneth Aldape, Jacob Mandel, Byram H. Ozer

PMC · DOI: 10.3389/fonc.2026.1670639 · Frontiers in Oncology · 2026-03-04

## TL;DR

This paper reports two rare adult cases of spinal pilocytic astrocytoma with a GTF2I::BRAF fusion, highlighting their long-term survival and unique clinical features.

## Contribution

The first case series describing GTF2I::BRAF fusion in adult spinal pilocytic astrocytoma.

## Key findings

- Both patients had stable disease over time despite initial misdiagnoses and complex clinical courses.
- Molecular testing confirmed GTF2I::BRAF fusion in spinal pilocytic astrocytoma in adults.
- The cases provide insights into the clinical and molecular characteristics of this rare fusion.

## Abstract

Pilocytic astrocytomas are driven by BRAF and mitogen-activated protein kinase (MAPK) alterations, typically KIAA1549::BRAF fusions. A rare GTF2I::BRAF fusion has been described, but little is known about these cases.

Here, we report two cases with GTF2I::BRAF fusions. Case 1 is a 36-year-old man initially diagnosed with myxopapillary ependymoma at the conus medullaris with three recurrences over 23 years requiring two surgeries, three rounds of radiation therapy, and one round of lapatinib/temozolomide. A distant disease focus in T3/T4 was sampled and tested with modern diagnostic techniques revealing a pilocytic astrocytoma on histology and methylation profiling. The patient has subsequently had stable clinical and radiographic findings. Case 2 is another 36-year-old man initially diagnosed with meningitis and later neurosarcoid who underwent biopsy after 12 years when his spinal leptomeningeal disease continued to progress and an intraventricular non-enhancing nodule emerged as a separate focus. Sampling of the leptomeningeal disease led to a diagnosis of pilocytic astrocytoma by histology and a divergent methylation profile. The patient has remained neurologically stable under radiographic surveillance without any intervention.

Radiographic, histological, and molecular data are presented for both cases and compared against the only other reported GTF2I::BRAF CNS case, as well as canonical versions of pilocytic astrocytoma.

To our knowledge, this is only the second case series highlighting a unique GTF2I::BRAF fusion and the first to describe it in adults in a spinal location. The manuscript contributes documentation of a rare fusion and tumor presentation to guide clinicians and potential research avenues.

## Linked entities

- **Genes:** BRAF (B-Raf proto-oncogene, serine/threonine kinase) [NCBI Gene 673], GTF2I (general transcription factor IIi) [NCBI Gene 2969], KIAA1549 (KIAA1549) [NCBI Gene 57670]
- **Chemicals:** lapatinib (PubChem CID 208908), temozolomide (PubChem CID 5394)
- **Diseases:** pilocytic astrocytoma (MONDO:0004000), myxopapillary ependymoma (MONDO:0016699), meningitis (MONDO:0021108)

## Full-text entities

- **Genes:** BRAF (B-Raf proto-oncogene, serine/threonine kinase) [NCBI Gene 673] {aka B-RAF1, B-raf, BRAF-1, BRAF1, NS7, RAFB1}
- **Diseases:** leptomeningeal disease (MESH:D008577), meningitis (MESH:D008580), tumor (MESH:D009369), myxopapillary ependymoma (MESH:D004806), Pilocytic astrocytomas (MESH:D001254)
- **Chemicals:** temozolomide (MESH:D000077204), lapatinib (MESH:D000077341)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12995792/full.md

## References

25 references — full list in the complete paper: https://tomesphere.com/paper/PMC12995792/full.md

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Source: https://tomesphere.com/paper/PMC12995792