# RSRC2 is a novel RNA-binding protein that safeguards mitotic fidelity by interacting with the lncRNA C1QTNF1-AS1

**Authors:** Parnia Babaei, Alice O Coomer, Kaliya Georgieva, Giulia Guiducci, Elisa Vitiello, Martin Dodel, Eleni Maniati, Hanya Elsayed Eid, Anisha Thind, Sneha Krishnamurthy, Anna Nawrocka, Sam Wallis, Jun Wang, Alena Shkumatava, Faraz K Mardakheh, Lovorka Stojic

PMC · DOI: 10.1093/nar/gkag229 · Nucleic Acids Research · 2026-03-17

## TL;DR

RSRC2, an RNA-binding protein, works with the long non-coding RNA C1QTNF1-AS1 to ensure accurate cell division by maintaining centrosome and spindle function.

## Contribution

RSRC2 is identified as a novel RNA-binding protein that interacts with C1QTNF1-AS1 to safeguard mitotic fidelity.

## Key findings

- RSRC2 and C1QTNF1-AS1 are essential for proper chromosome alignment and spindle formation during mitosis.
- RSRC2 regulates splicing and centriole integrity by interacting with centrosomal scaffold proteins PCNT and CDK5RAP2.
- C1QTNF1-AS1 directs RSRC2 to the centrosome, where it promotes PCNT mRNA recruitment.

## Abstract

Mitotic fidelity requires proper chromosome alignment at the spindle equator, a process known as chromosome congression, mediated by well-established protein networks. Although RNA-binding proteins (RBPs) and non-coding RNAs (ncRNAs) have been implicated in cell division, their functional interplay remains unclear. Here, we show that RSRC2, a poorly characterized RBP, is essential for proper cell division through its interaction with the long ncRNA C1QTNF1–AS1. Loss of either RSRC2 or C1QTNF1–AS1 causes mitotic defects. RSRC2 associates with distinct protein sets involved in splicing and centrosome biogenesis, regulating mitotic gene splicing and maintaining centriole integrity. RSRC2 depletion impairs recruitment of the centrosomal scaffold proteins PCNT and CDK5RAP2, which are essential for organizing microtubules to form the mitotic spindle. While C1QTNF1–AS1 loss does not alter RSRC2 expression or its global interactome, it reduces RSRC2 localization at the centrosome. We also find that C1QTNF1–AS1 directs RSRC2 to the centrosome, where RSRC2, in turn, promotes the recruitment of PCNT mRNA to the centrosome. Our study highlights the critical role of RNA–protein complexes in ensuring error-free mitosis and identifies RSRC2 as a multifunctional protein with dual roles in splicing and centrosome-associated RNA localization.

Graphical Abstract

## Linked entities

- **Genes:** RSRC2 (arginine and serine rich coiled-coil 2) [NCBI Gene 65117], C1QTNF1-AS1 (C1QTNF1 antisense RNA 1) [NCBI Gene 100507410], PCNT (pericentrin) [NCBI Gene 5116], CDK5RAP2 (CDK5 regulatory subunit associated protein 2) [NCBI Gene 55755]
- **Proteins:** RSRC2 (arginine and serine rich coiled-coil 2), PCNT (pericentrin), CDK5RAP2 (CDK5 regulatory subunit associated protein 2)

## Full-text entities

- **Genes:** SS18L1 (SS18L1 subunit of BAF chromatin remodeling complex) [NCBI Gene 26039] {aka CREST, LP2261, SMARCL2}, SUGP1 (SURP and G-patch domain containing 1) [NCBI Gene 57794] {aka F23858, RBP, SF4}, RNASE1 (ribonuclease A family member 1, pancreatic) [NCBI Gene 6035] {aka RAC1, RIB1, RNS1}, TAS2R12P (taste 2 receptor member 12, pseudogene) [NCBI Gene 266656] {aka PS10, T2R12, TAS2R12, TAS2R26}, C1QTNF1-AS1 (C1QTNF1 antisense RNA 1) [NCBI Gene 100507410], SNRNP200 (small nuclear ribonucleoprotein U5 subunit 200) [NCBI Gene 23020] {aka ASCC3L1, BRR2, HELIC2, RP33, U5-200KD}, GAPDH (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 2597] {aka G3PD, GAPD, HEL-S-162eP}, HNRNPU (heterogeneous nuclear ribonucleoprotein U) [NCBI Gene 3192] {aka DEE54, EIEE54, GRIP120, HNRNPU-AS1, HNRPU, SAF-A}, PABPC3 (poly(A) binding protein cytoplasmic 3) [NCBI Gene 5042] {aka PABP3, PABPL3, tPABP}, RPS18 (ribosomal protein S18) [NCBI Gene 6222] {aka D6S218E, HKE3, KE-3, KE3, S18, uS13}, HNRNPK (heterogeneous nuclear ribonucleoprotein K) [NCBI Gene 3190] {aka AUKS, CSBP, HNRPK, TUNP}, DIAPH2 (diaphanous related formin 2) [NCBI Gene 1730] {aka DIA, DIA2, DRF2, POF, POF2, POF2A}, CENPE (centromere protein E) [NCBI Gene 1062] {aka CENP-E, KIF10, MCPH13, PPP1R61}, LINC02605 (long intergenic non-protein coding RNA 2605) [NCBI Gene 112935892] {aka AS, IL-7, IL-7-AS}, PRPF8 (pre-mRNA processing factor 8) [NCBI Gene 10594] {aka HPRP8, PRP8, PRPC8, RP13, SNRNP220}, SNRNP70 (small nuclear ribonucleoprotein U1 subunit 70) [NCBI Gene 6625] {aka RNPU1Z, RPU1, SNRP70, Snp1, U1-70K, U170K}, LGR5 (leucine rich repeat containing G protein-coupled receptor 5) [NCBI Gene 8549] {aka FEX, GPR49, GPR67, GRP49, HG38}, H2BC21 (H2B clustered histone 21) [NCBI Gene 8349] {aka GL105, H2B, H2B-GL105, H2B.1, H2BE, H2BFQ}, CAT (catalase) [NCBI Gene 847], AURKA (aurora kinase A) [NCBI Gene 6790] {aka AIK, ARK1, AURA, BTAK, PPP1R47, STK15}, SRRM1 (serine and arginine repetitive matrix 1) [NCBI Gene 10250] {aka 160-KD, POP101, SRM160}, PCNT (pericentrin) [NCBI Gene 5116] {aka KEN, MOPD2, PCN, PCNT2, PCNTB, PCTN2}, NEB (nebulin) [NCBI Gene 4703] {aka AMC6, NEB177D, NEM2}, U2AF2 (U2 small nuclear RNA auxiliary factor 2) [NCBI Gene 11338] {aka DEVDFB, U2AF65}, PTPRG (protein tyrosine phosphatase receptor type G) [NCBI Gene 5793] {aka HPTPG, PTPG, R-PTP-GAMMA, RPTPG}, XIST (X inactive specific transcript) [NCBI Gene 7503] {aka DXS1089, DXS399E, LINC00001, NCRNA00001, SXI1, swd66}, CD2BP2 (CD2 cytoplasmic tail binding protein 2) [NCBI Gene 10421] {aka FWP010, LIN1, PPP1R59, Snu40, U5-52K}, RSRC2 (arginine and serine rich coiled-coil 2) [NCBI Gene 65117], ERVK-8 (endogenous retrovirus group K member 8, envelope) [NCBI Gene 619465] {aka ERVK8, HERV-K115, PR, Protease, Proteinase, envK6}, PLK2 (polo like kinase 2) [NCBI Gene 10769] {aka SNK, hPlk2, hSNK}, SRRM2 (serine/arginine repetitive matrix 2) [NCBI Gene 23524] {aka 300-KD, CWF21, Cwc21, HSPC075, MRD72, SRL300}, NDC80 (NDC80 kinetochore complex component) [NCBI Gene 10403] {aka HEC, HEC1, HsHec1, KNTC2, TID3, hsNDC80}, RIPK1 (receptor interacting serine/threonine kinase 1) [NCBI Gene 8737] {aka AIEFL, IMD57, RIP, RIP-1, RIP1}, RB1CC1 (RB1 inducible coiled-coil 1) [NCBI Gene 9821] {aka ATG17, CC1, FIP200, PPP1R131}, HBB (hemoglobin subunit beta) [NCBI Gene 3043] {aka CD113t-C, ECYT6, beta-globin}, SON (SON DNA and RNA binding protein) [NCBI Gene 6651] {aka BASS1, C21orf50, DBP-5, NREBP, SON3, TOKIMS}, CDK5RAP2 (CDK5 regulatory subunit associated protein 2) [NCBI Gene 55755] {aka C48, Cep215, MCPH3}, SRSF2 (serine and arginine rich splicing factor 2) [NCBI Gene 6427] {aka PR264, SC-35, SC35, SFRS2, SFRS2A, SRp30b}, C1QTNF1 (C1q and TNF related 1) [NCBI Gene 114897] {aka CTRP1, GIP, ZSIG37}, EEF1A2 (eukaryotic translation elongation factor 1 alpha 2) [NCBI Gene 1917] {aka DEE33, EEF1AL, EF-1-alpha-2, EF1A, EIEE33, HS1}, MAD2L1 (mitotic arrest deficient 2 like 1) [NCBI Gene 4085] {aka HSMAD2, MAD2}, TP53 (tumor protein p53) [NCBI Gene 7157] {aka BCC7, BMFS5, LFS1, P53, TRP53}, PRPF19 (pre-mRNA processing factor 19) [NCBI Gene 27339] {aka NMP200, PRP19, PSO4, SNEV, UBOX4, hPSO4}, MASP2 (MBL associated serine protease 2) [NCBI Gene 10747] {aka MAP-2, MAP19, MASP-2, MASP1P1, sMAP}
- **Diseases:** adrenal cortical carcinoma (MESH:D018268), Cancer (MESH:D009369), ciliopathies (MESH:D000072661), mitotic (MESH:C536987), centrosome and cilia disorders (MESH:C536287), Congression defects (MESH:D000013), genetic disorders (MESH:D030342), colon carcinoma (MESH:D003110), breast cancer (MESH:D001943), AS (MESH:C536589), oesophageal adenocarcinoma (MESH:D000230), infection (MESH:D007239), neurodevelopmental disorders (MESH:D002658), N (MESH:C536108), colorectal cancer (MESH:D015179), CIN (MESH:D043171), spindle defects (MESH:D002277), liver cancer (MESH:D006528), microcephaly (MESH:D008831)
- **Chemicals:** SA (MESH:D000077145), DMSO (MESH:D004121), peptides (MESH:D010455), oil (MESH:D009821), Methanol (MESH:D000432), PI (MESH:D010716), sodium fluoride (MESH:D012969), Nocodazole (MESH:D015739), SMF (MESH:C047597), APS (MESH:D000250), Ciliobrevin D (MESH:C000595851), acetonitrile (MESH:C032159), formaldehyde (MESH:D005557), TE (MESH:D013691), ammonium bicarbonate (MESH:C027043), FA (MESH:D005492), 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide (MESH:D005022), Glycine (MESH:D005998), n-dodecyl beta-d-maltoside (MESH:C040358), DTT (MESH:D004229), H2O (MESH:D014867), trypan blue (MESH:D014343), formic acid (MESH:C030544), Bis-Tris (MESH:C026272), TBS-T (MESH:C027647), MES (MESH:C004550), NaCl (MESH:D012965), Urea (MESH:D014508), glucose (MESH:D005947), TEMED (MESH:C005798), HCl (MESH:D006851), oligonucleotide (MESH:D009841), CO2 (MESH:D002245), iodoacetamide (MESH:D007460), Tween (MESH:D011136), LNA (MESH:C477371), MOPS (MESH:C008550), sodium acrylate (MESH:C036658), Triton X-100 (MESH:D017830), ethanol (MESH:D000431), NP-40 (MESH:C010615), U (MESH:D014501), PMSF (MESH:D010664), SYBR  Green (MESH:C098022), KCL (MESH:D011189), ammonium persulfate (MESH:C031276), acrylamide (MESH:D020106), Lipofectamine (MESH:C086724), sodium deoxycholate (MESH:D003840), and (MESH:C019152), EGTA (MESH:D004533), ASO (MESH:D016376), TFA (MESH:D014269), HF (MESH:D006195), agarose (MESH:D012685), polybrene (MESH:D006583), F12 medium (-), McCoy's 5A medium (MESH:C113109), DDM (MESH:C117975), TRIzol (MESH:C411644)
- **Species:** Rattus norvegicus (brown rat, species) [taxon 10116], Mycoplasma (genus) [taxon 2093], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Escherichia coli (E. coli, species) [taxon 562], Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]
- **Mutations:** M0314L, M0525S, M0484S, M0531S, M2200S, R0519S, E5510S, M0491, M0201S, M0491S, C2987H, M2200
- **Cell lines:** HCT116 — Homo sapiens (Human), Colon carcinoma, Cancer cell line (CVCL_0291), HepG2 — Homo sapiens (Human), Hepatoblastoma, Cancer cell line (CVCL_0027), Hs_PCNT_E19 3'SS (-11) — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_B2A2), S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232), MDA-MB-231 — Homo sapiens (Human), Breast adenocarcinoma, Cancer cell line (CVCL_0062), OE-19 — Homo sapiens (Human), Esophageal adenocarcinoma, Cancer cell line (CVCL_1622), RPE1 — Homo sapiens (Human), Telomerase immortalized cell line (CVCL_4388), HEK293T — Homo sapiens (Human), Transformed cell line (CVCL_0063), S6L — Sus scrofa (Pig), Spontaneously immortalized cell line (CVCL_RX33), S2F-L — Mus musculus (Mouse), Hybridoma (CVCL_C4BW), HeLa — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_0030), GFP — Mus musculus (Mouse), Hybridoma (CVCL_A8DW), NEB5alpha — Mus musculus (Mouse), Hybridoma (CVCL_B5J7)

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## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12993456/full.md

## References

127 references — full list in the complete paper: https://tomesphere.com/paper/PMC12993456/full.md

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Source: https://tomesphere.com/paper/PMC12993456