# Synthetic aptamer mechanoreceptors enable cell-specific force sensing and temporal control via DNA circuits

**Authors:** Tao Xu, Soumya Sethi, Christoph Drees, Andreas Walther

PMC · DOI: 10.1038/s41467-026-70765-w · Nature Communications · 2026-03-15

## TL;DR

Scientists created DNA-based sensors that can detect mechanical forces in specific cells and control their behavior over time.

## Contribution

The novel contribution is an all-DNA mechanosensing platform using aptamers for cell-specific and programmable force sensing.

## Key findings

- Aptamer-based mechanoprobes enable cell-type-specific force transduction through noncanonical receptors.
- Integration with DNA reaction networks allows reversible and temporally controlled mechanoresponses.
- The system provides a modular framework for tunable mechanotransduction circuits in synthetic biology.

## Abstract

Cells interpret mechanical cues from their microenvironment with spatiotemporal precision to guide adaptive behaviors. However, engineering synthetic mechanosensing systems with both cell-specificity and programmability remains challenging, especially when targeting ubiquitous classical mechanoreceptors. Here, we introduce an all-DNA mechanosensing platform based on aptamers that transmit force through noncanonical surface receptors. Aptamer–receptor recognition acts as a molecular gate for force transduction, enabling the design of mechanoprobes with cell-type selectivity. These probes interpret diverse mechanical inputs via distinct mechanisms, including actomyosin-driven contractility and membrane ruffling during macropinocytosis. By integrating aptamer mechanoprobes with upstream DNA reaction networks, we achieve reversible and temporally programmable mechanoresponses. This modular, all-nucleic-acid system offers a general framework for constructing tunable mechanotransduction circuits. It expands the design space for synthetic mechanobiology and provides opportunities for autonomous, multi-layered mechanical–biochemical regulation in tissue engineering, morphogenesis, and dynamic cell programming.

Engineering synthetic mechanosensing systems with both cell-specificity and programmability remains challenging, especially for classical mechanoreceptors. Here, the authors develop an all-DNA mechanosensing platform based on aptamers that transmit force through noncanonical surface receptors.

## Full-text entities

- **Genes:** CD274 (CD274 molecule) [NCBI Gene 29126] {aka ADMIO5, B7-H, B7H1, PD-L1, PDCD1L1, PDCD1LG1}, COL18A1 (collagen type XVIII alpha 1 chain) [NCBI Gene 80781] {aka GLCC, KNO, KNO1, KS}, WASL (WASP like actin nucleation promoting factor) [NCBI Gene 8976] {aka N-WASP, NWASP, WASPB}, MYH14 (myosin heavy chain 14) [NCBI Gene 79784] {aka DFNA4, DFNA4A, FP17425, MHC16, MYH17, NMHC II-C}, MYH9 (myosin heavy chain 9) [NCBI Gene 4627] {aka BDPLT6, DFNA17, EPSTS, FTNS, MATINS, MHA}, CDC42 (cell division cycle 42) [NCBI Gene 998] {aka CDC42Hs, G25K, TKS}, RAC1 (Rac family small GTPase 1) [NCBI Gene 5879] {aka MIG5, MRD48, Rac-1, TC-25, p21-Rac1}, CD28 (CD28 molecule) [NCBI Gene 940] {aka IMD123, Tp44}, PTK7 (protein tyrosine kinase 7 (inactive)) [NCBI Gene 514819], MUC1 (mucin 1, cell surface associated) [NCBI Gene 4582] {aka ADMCKD, ADMCKD1, ADTKD2, CA 15-3, CD227, Ca15-3}, PTK7 (protein tyrosine kinase 7 (inactive)) [NCBI Gene 5754] {aka CCK-4, CCK4}, PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 5291] {aka P110BETA, PI3K, PI3KBETA, PIK3C1}, ACTE1 (actin epsilon 1) [NCBI Gene 528168], WAS (WASP actin nucleation promoting factor) [NCBI Gene 7454] {aka IMD2, SCNX, THC, THC1, WASP, WASPA}, MUC1 (mucin 1, cell surface associated) [NCBI Gene 281333] {aka mucin}, NUCLEOLIN (nucleolin multifunctional protein) [NCBI Gene 4691] {aka C23, NCL, Nsr1}, PXN (paxillin) [NCBI Gene 5829], EPCAM (epithelial cell adhesion molecule) [NCBI Gene 514039] {aka TACSTD1}, EPCAM (epithelial cell adhesion molecule) [NCBI Gene 4072] {aka Ber-Ep4, BerEp4, DIAR5, EGP-2, EGP314, EGP40}, TBRG1 (transforming growth factor beta regulator 1) [NCBI Gene 84897] {aka NIAM, TB-5}
- **Diseases:** FA (MESH:C565561), cancer (MESH:D009369)
- **Chemicals:** 5-(N-ethyl-N-isopropyl) amiloride (MESH:C039614), paraformaldehyde (MESH:C003043), MgCl2 (MESH:D015636), RGD (MESH:C047981), sulfuric acid (MESH:C033158), Alexa Fluor  647 (MESH:C569686), NaOH (MESH:D012972), 1,2-Dioleoyl-sn-glycero-3-phosphocholine (MESH:C017251), Lipid (MESH:D008055), Alexa Fluor  488 (MESH:C000711379), Biotin (MESH:D001710), Blebbistatin (MESH:C472645), BHQ2 (-), Hoechst 34580 (MESH:C572112), Cytochalasin D (MESH:D015638), calcium (MESH:D002118), streptomycin (MESH:D013307), chloroform (MESH:D002725), C-1 (MESH:C400149), Lipofectamine (MESH:C086724), ethanol (MESH:D000431), Triton X-100 (MESH:D017830), Phalloidin (MESH:D010590), CO2 (MESH:D002245), ATP (MESH:D000255), amine (MESH:D000588), LY 294002 (MESH:C085911), LP (MESH:D008070), S (MESH:D013455), oligonucleotides (MESH:D009841), (3-Aminopropyl)triethoxysilane (MESH:C477625), CPZ (MESH:D002746), AS1411 (MESH:C513936), N2 (MESH:D009584), water (MESH:D014867), P (MESH:D010758), TE (MESH:D013691), penicillin (MESH:D010406), Hydrogen peroxide (MESH:D006861), MbetaCD (MESH:C108732), oil (MESH:D009821)
- **Species:** Homo sapiens (human, species) [taxon 9606], Oryctolagus cuniculus (domestic rabbit, species) [taxon 9986]
- **Cell lines:** HeLa — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_0030), MDA-MB-231 — Homo sapiens (Human), Breast adenocarcinoma, Cancer cell line (CVCL_0062), S2.2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232), S2.2 MP — Mus musculus (Mouse), Hybridoma (CVCL_A0RL), ACC — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_6872), HepG2 — Homo sapiens (Human), Hepatoblastoma, Cancer cell line (CVCL_0027), A549 — Homo sapiens (Human), Lung adenocarcinoma, Cancer cell line (CVCL_0023)

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## Figures

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## References

1 references — full list in the complete paper: https://tomesphere.com/paper/PMC12992700/full.md

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Source: https://tomesphere.com/paper/PMC12992700