# Optimized collagenase biosynthesis (Bacillus siamensis strain Z1) and its application in collagen hydrolysate-mediated silver and zinc oxide nanoparticles synthesis and characterization with antibacterial, antioxidant and cytotoxic activities

**Authors:** Archana G. Revankar, Zabin K. Bagewadi, Ibrahim Aljaezi, Omaish S. Alqahtani, Neha P. Bochageri, Bassam S. M. Al Kazman, Ibrahim Ahmed Shaikh, Basheerahmed Abdulaziz Mannasaheb, Muskan M. Naik

PMC · DOI: 10.1371/journal.pone.0344482 · PLOS One · 2026-03-16

## TL;DR

This study explores a marine bacterium that produces collagenase, which breaks down collagen waste and is used to create nanoparticles with antibacterial, antioxidant, and cancer-fighting properties.

## Contribution

The study introduces an optimized method for collagenase biosynthesis and its novel application in nanoparticle synthesis with biomedical potential.

## Key findings

- Collagenase production was optimized to 4.55 U/mL with a 17.93-fold enhancement using central composite design.
- Collagen hydrolysate was used to synthesize AgNP and ZnONP with antibacterial effects against B. cereus and E. coli.
- AgNP and ZnONP showed antioxidant activity and cytotoxicity on MCF-7 breast cancer cells with IC50 values of 8.87 µg/mL and 25.21 µg/mL, respectively.

## Abstract

Globally, environmental pollution caused by resilient protein like collagen is escalating due to inefficient disposal practices. Accumulation of collagen waste poses ecological threat, necessitating management strategies. Current study discloses collagenolytic bacterium, Bacillus siamensis strain Z1, isolated from marine water (Goa) demonstrating collagen breakdown and inducing collagenase biosynthesis. Production kinetics revealed optimal collagenase production (4.55 U/mL) on 2nd day with a protein content of 0.69 mg/mL. Influence of physiochemical parameters, including inoculum size, metal ions, carbon and nitrogen sources, pH and temperature on collagenase yield was optimized achieving 17.93 folds enhancement by central composite design. Silver (AgNP) and Zinc oxide (ZnONP) nanoparticles were biosynthesized using collagen hydrolysate derived from marine collagen through collagenase action and characterized using UV-Visible spectroscopy, Fourier Transform Infrared Spectroscopy, X-ray Diffraction, Scanning Electron Microscopy with Energy Dispersive X-ray, Thermogravimetric Analysis and Atomic Force Microscopy elucidated thermostability, structure and surface characteristics. Antibacterial effect of nanoparticles was observed against B. cereus and E. coli. AgNP and ZnONP demonstrated antioxidant properties assessed by ABTS and DPPH assays. AgNP and ZnONP exhibited cytotoxicity on MCF-7 breast cancer cell lines, with IC50 values 8.87 µg/mL and 25.21 µg/mL respectively. The study highlights biotechnological potential of collagenase in generating bioactive products for therapeutical and biomedical advancements.

## Linked entities

- **Chemicals:** silver (PubChem CID 23954), zinc oxide (PubChem CID 3007857), ABTS (PubChem CID 35688)
- **Diseases:** breast cancer (MONDO:0004989)
- **Species:** Bacillus siamensis (taxon 659243), Bacillus cereus (taxon 1396), Escherichia coli (taxon 562), Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** CYCS (cytochrome c, somatic) [NCBI Gene 54205] {aka CYC, HCS, THC4}
- **Diseases:** Cancer (MESH:D009369), weight loss (MESH:D015431), tissue (MESH:D017695), RSM (MESH:D010534), NCIM (MESH:D009783), inflammation (MESH:D007249), necrosis (MESH:D009336), breast cancer (MESH:D001943), heart (MESH:D006331), C (OMIM:211750), CCD (MESH:D058617), osteoarthritis (MESH:D010003), mitochondrial dysfunction (MESH:D028361), join pain (MESH:D010146), cytotoxic (MESH:D064420)
- **Chemicals:** leucine (MESH:D007930), phospholipids (MESH:D010743), amino acids (MESH:D000596), fructose (MESH:D005632), DMSO (MESH:D004121), salt (MESH:D012492), cefixime (MESH:D020682), phosphate (MESH:D010710), lactose (MESH:D007785), ROS (MESH:D017382), sodium nitrate (MESH:C031618), K2HPO4 (MESH:C013216), DNS (MESH:C022306), 3-(4, 5-dimethylthiazol2-yl)- 2,5-diphenyltetrazolium bromide (MESH:C022616), melatonin (MESH:D008550), NaCl (MESH:D012965), nitrogen (MESH:D009584), Urea (MESH:D014508), Glucose (MESH:D005947), potassium persulfate (MESH:C009007), sugars (MESH:D000073893), xanthan gum (MESH:C002563), ammonium chloride (MESH:D000643), aluminium (MESH:D000535), Water (MESH:D014867), MTT (MESH:C070243), Gly (MESH:D005998), KBr (MESH:C039004), silver nanoparticle (MESH:C586932), CO2 (MESH:D002245), uracil (MESH:D014498), ascorbic acid (MESH:D001205), DPPH (MESH:C004931), Metal (MESH:D008670), HCl (MESH:D006851), Sucrose (MESH:D013395), Ninhydrin (MESH:D009555), hydroxyproline (MESH:D006909), thiol (MESH:D013438), ethanol (MESH:D000431), O (MESH:D010100), phenols (MESH:D010636), C (MESH:D002244), Serine (MESH:D012694), MgSO4 (MESH:D008278), gamma-aminobutyric acid (MESH:D005680), cholesterol (MESH:D002784), , alpha-Diphenyl-beta-picryl-hydroxyl (-), Citrate (MESH:D019343), CuO (MESH:C030973), carboxylic acids (MESH:D002264), zinc acetate dihydrate (MESH:D019345), calcium (MESH:D002118), H (MESH:D006859), Doxorubicin (MESH:D004317), NaOH (MESH:D012972), gold (MESH:D006046), starch (MESH:D013213), polysaccharides (MESH:D011134), lipid (MESH:D008055)
- **Species:** Brevundimonas vesicularis (species) [taxon 41276], Thermoactinomyces sp. (species) [taxon 2025], Hathewaya histolytica (species) [taxon 1498], Vibrio (genus) [taxon 662], Streptomyces scabiei (species) [taxon 1930], Trichosporon sp. (species) [taxon 1856742], Rhopaloeides odorabile (species) [taxon 476028], Pseudomonas aeruginosa (species) [taxon 287], Hypsizygus ulmarius (species) [taxon 71891], Aspergillus sp. (species) [taxon 5065], Clostridium perfringens (species) [taxon 1502], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Klebsiella pneumoniae (species) [taxon 573], Escherichia coli (E. coli, species) [taxon 562], Bacillus subtilis (species) [taxon 1423], Lactobacillus gasseri (species) [taxon 1596], Aspergillus serratalhadensis (species) [taxon 2283851], Porphyromonas endodontalis (species) [taxon 28124], Bacillus sp. (in: firmicutes) (species) [taxon 1409], Glycine max (soybean, species) [taxon 3847], Swietenia macrophylla (species) [taxon 43891], Vibrio alginolyticus (species) [taxon 663], Priestia megaterium (species) [taxon 1404], Penicillium citrinum (species) [taxon 5077], Enterobacter cloacae (species) [taxon 550], Staphylococcus aureus (species) [taxon 1280], Aspergillus terreus (species) [taxon 33178], Ocimum basilicum (basil, species) [taxon 39350], Mus musculus (house mouse, species) [taxon 10090], Vibrio parahaemolyticus (species) [taxon 670], Bacillus siamensis (species) [taxon 659243], Porphyromonas gingivalis (species) [taxon 837], Bacillus cereus (species) [taxon 1396], Calotropis gigantea (bowstring hemp, species) [taxon 4066], Zingiber officinale (ginger, species) [taxon 94328], A. flavus [taxon 315677], Rhizoctonia solani (species) [taxon 456999], Chryseobacterium contaminans (species) [taxon 1423959], Gallus gallus (bantam, species) [taxon 9031], Homo sapiens (human, species) [taxon 9606], Lactobacillus sp. (species) [taxon 1591], Pseudomonas sp. (species) [taxon 306]
- **Cell lines:** MCF-7 — Homo sapiens (Human), Invasive breast carcinoma of no special type, Cancer cell line (CVCL_0031), HCT116 — Homo sapiens (Human), Colon carcinoma, Cancer cell line (CVCL_0291), A549 — Homo sapiens (Human), Lung adenocarcinoma, Cancer cell line (CVCL_0023), Caco-2 — Homo sapiens (Human), Colon adenocarcinoma, Cancer cell line (CVCL_0025), WI38 — Homo sapiens (Human), Finite cell line (CVCL_0579), HePG2 — Homo sapiens (Human), Hepatoblastoma, Cancer cell line (CVCL_0027), L-929 — Mus musculus (Mouse), Spontaneously immortalized cell line (CVCL_AR58), ATCC - HTB - 22 — Mus musculus (Mouse), Hybridoma (CVCL_A8FQ), MO-1 — Mus musculus (Mouse), Hybridoma (CVCL_A0RI)

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12991227/full.md

## References

116 references — full list in the complete paper: https://tomesphere.com/paper/PMC12991227/full.md

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Source: https://tomesphere.com/paper/PMC12991227