# Synthesis and anti-cancer activity of naphthalimide–organylselanyl conjugates

**Authors:** Rajkumar Ravi, Selvakumar Karuthapandi

PMC · DOI: 10.3762/bjoc.22.29 · Beilstein Journal of Organic Chemistry · 2026-03-09

## TL;DR

This study reports the synthesis and anticancer activity of two naphthalimide–organylselanyl compounds against breast cancer cells.

## Contribution

The paper introduces novel naphthalimide–organylselanyl conjugates with promising anticancer activity and binding affinities to EGFR.

## Key findings

- NAP-SePh and NAP-Se(n-Oct) showed IC₅₀ values of 27.92 ± 3 µM and 23.06 ± 3 µM against MDA-MB-231 cells.
- Molecular docking simulations showed strong binding affinities to the EGFR tyrosine kinase domain.
- NAP-SePh was structurally confirmed using single-crystal X-ray diffraction analysis.

## Abstract

The structure-based approach remains a valuable tool for rapid and high-throughput drug discovery and lead optimisation. In this study, we report the in-silico modelling and anticancer activity of two 1,8-napthalimide (NAP) derivatives containing organyl selanyl groups. The organylselanyl function n-octylselanyl (n-OctSe) or phenylselanyl (PhSe) was introduced at the 6-position of a naphthalimide structure having a conserved 3-(4-(tert-butyl)phenoxy)propyl function at the imide nitrogen. The resultant naphthalimide–organylselanyl conjugates, NAP-SePh and NAP-Se(n-Oct), were characterised using various spectroscopic techniques, including FTIR, ¹H, ¹³C, ⁷⁷Se NMR and high-resolution mass spectrometry (HRMS). NAP-SePh was structurally characterised by single-crystal X-ray diffraction analysis. The anticancer potential of the NAP-SePh and NAP-Se(n-Oct) was evaluated using an in vitro cell viability assay with MDA-MB-231 triple-negative breast cancer (TNBC) cells. The IC₅₀ values for compounds NAP-SePh and NAP-Se(n-Oct) were 27.92 ± 3 µM and 23.06 ± 3 μM, respectively. Molecular docking simulations revealed that NAP-SePh and NAP-Se(n-Oct) show binding affinities of −10.39 and −8.53 kcal/mol for the (1M17) active, and −10.66 and −10.59 kcal/mol for the (4HJO) inactive conformation of the tyrosine kinase domain of the epidermal growth factor receptor (EGFR) in which erlotinib, a well-known anticancer drug, binds.

## Linked entities

- **Chemicals:** naphthalimide (PubChem CID 66491), erlotinib (PubChem CID 176870)
- **Diseases:** breast cancer (MONDO:0004989), triple-negative breast cancer (MONDO:0005494)

## Full-text entities

- **Genes:** TXK (TXK tyrosine kinase) [NCBI Gene 7294] {aka BTKL, PSCTK5, PTK4, RLK, TKL}, EGFR (epidermal growth factor receptor) [NCBI Gene 1956] {aka ERBB, ERBB1, ERRP, HER1, NISBD2, NNCIS}
- **Diseases:** cancer (MESH:D009369), MDA-MB-231 triple-negative breast cancer (MESH:D064726)
- **Chemicals:** erlotinib (MESH:D000069347), naphthalimide (MESH:D053644), NAP-SePh (-), 13C (MESH:C000615229)

## Full text

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## Figures

11 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12990455/full.md

## References

78 references — full list in the complete paper: https://tomesphere.com/paper/PMC12990455/full.md

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Source: https://tomesphere.com/paper/PMC12990455