# Phase I trial of the combination of bortezomib and clofarabine in adults with refractory tumors

**Authors:** Jibran Ahmed, Andre DeSouza, Shivaani Kummar, Lawrence Rubinstein, Geraldine O’Sullivan-Coyne, Jeevan Govindharajulu, William Herrick, Kate Ferry-Galow, Li Li, Deborah F. Wilsker, Murielle Hogu, Richard Piekarz, Robert Meehan, Mohamad Adham Salkeni, Sarah Shin, Brandon Miller, Jennifer Zlott, Lamin Juwara, Karen Gray, Laura Kuhlmann, Apurva Srivastava, Ralph E. Parchment, James H. Doroshow, Naoko Takebe, Alice P. Chen

PMC · DOI: 10.1007/s00280-026-04868-y · Cancer Chemotherapy and Pharmacology · 2026-03-14

## TL;DR

A clinical trial tested bortezomib and clofarabine in patients with resistant tumors, finding limited effectiveness but identifying a maximum tolerated dose.

## Contribution

This study reports the first phase I trial of bortezomib and clofarabine in refractory tumors, establishing safety and dose limits.

## Key findings

- The MTD for bortezomib and clofarabine was determined for solid tumors but not for MDS due to low enrollment.
- Some patients showed stable disease for multiple cycles, but antitumor effects were limited.
- Biopsy analysis showed increased cell death and DNA damage response markers in some patients.

## Abstract

The proteasome inhibitor bortezomib and purine nucleoside analog clofarabine combination had greater than additive activity in the NCI-ALMANAC preclinical screen. We conducted a phase 1 trial (NCT02211755) to evaluate the combination’s safety and efficacy in patients.

We administered bortezomib subcutaneously on days 1 and 4, and clofarabine intravenously on days 1–5 of each 21-day cycle. The primary objective was to establish the safety, tolerability, and maximum tolerated dose (MTD) of bortezomib and clofarabine in patients with refractory solid tumors, lymphomas, or MDS. The secondary objective was to determine the effects of the combination on biomarkers of cell death and DNA damage response (DDR) in tumor biopsies.

Of 28 patients enrolled, 11 had a best response of stable disease (median 5 cycles; range 2–10 cycles), including 5 patients (4 from the solid tumor cohort, 2 of which were at MTD) with stable disease for ≥ 6 cycles. The MTD for the solid tumor cohort was 1.3 mg/m2 bortezomib on days 1 and 4, and 1.5 mg/m2 clofarabine on days 1–5 of each cycle. The MDS cohort closed prior to MTD determination, due to low accrual. The most common study drug related adverse events were hematologic. Two out of 3 patients with evaluable biopsies had increased markers of cell death, and 1 patient also had increased DDR markers after treatment.

The combination of bortezomib with clofarabine demonstrated limited antitumor effects possibly due to the inability to reach the efficacious doses achieved in preclinical models.

The online version contains supplementary material available at 10.1007/s00280-026-04868-y.

## Linked entities

- **Chemicals:** bortezomib (PubChem CID 387447), clofarabine (PubChem CID 119182)
- **Diseases:** MDS (MONDO:0018881)

## Full-text entities

- **Genes:** MUC1 (mucin 1, cell surface associated) [NCBI Gene 4582] {aka ADMCKD, ADMCKD1, ADTKD2, CA 15-3, CD227, Ca15-3}, STING1 (stimulator of interferon response cGAMP interactor 1) [NCBI Gene 340061] {aka ERIS, MITA, MPYS, NET23, SAVI, STING}, BAK1 (BCL2 antagonist/killer 1) [NCBI Gene 578] {aka BAK, BAK-LIKE, BCL2L7, CDN1}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, PTPRC (protein tyrosine phosphatase receptor type C) [NCBI Gene 5788] {aka B220, CD45, CD45R, GP180, IMD105, L-CA}, TRIM28 (tripartite motif containing 28) [NCBI Gene 10155] {aka KAP1, PPP1R157, RNF96, TF1B, TIF1B, TIF1beta}, ZHX2 (zinc fingers and homeoboxes 2) [NCBI Gene 22882] {aka AFR1, RAF}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, CASP3 (caspase 3) [NCBI Gene 836] {aka CPP32, CPP32B, SCA-1}, VIM (vimentin) [NCBI Gene 7431], PSMB5 (proteasome 20S subunit beta 5) [NCBI Gene 5693] {aka LMPX, MB1}, NFKBIA (NFKB inhibitor alpha) [NCBI Gene 4792] {aka EDAID2, IKBA, MAD-3, NFKBI}, BAX (BCL2 associated X, apoptosis regulator) [NCBI Gene 581] {aka BCL2L4}, ADA2 (adenosine deaminase 2) [NCBI Gene 51816] {aka ADGF, CECR1, IDGFL, PAN, SNEDS, VAIHS}, H2AX (H2A.X variant histone) [NCBI Gene 3014] {aka H2A.X, H2A/X, H2AFX}, MCL1 (MCL1 apoptosis regulator, BCL2 family member) [NCBI Gene 4170] {aka BCL2L3, EAT, MCL1-ES, MCL1L, MCL1S, Mcl-1}, GPHB5 (glycoprotein hormone subunit beta 5) [NCBI Gene 122876] {aka B5, GPB5, ZLUT1}, GSDMD (gasdermin D) [NCBI Gene 79792] {aka DF5L, DFNA5L, FKSG10, GSDMDC1}, MAP2K1 (mitogen-activated protein kinase kinase 1) [NCBI Gene 5604] {aka CFC3, MAPKK1, MEK1, MEL, MKK1, PRKMK1}, BCL2L1 (BCL2 like 1) [NCBI Gene 598] {aka BCL-XL/S, BCL2L, BCLX, Bcl-X, PPP1R52}, MET (MET proto-oncogene, receptor tyrosine kinase) [NCBI Gene 4233] {aka AUTS9, DA11, DFNB97, HGFR, RCCP2, c-Met}, PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 5291] {aka P110BETA, PI3K, PI3KBETA, PIK3C1}, NLRP2 (NLR family pyrin domain containing 2) [NCBI Gene 55655] {aka CLR19.9, NALP2, NBS1, OZEMA18, PAN1, PYPAF2}
- **Diseases:** peripheral neuropathy (MESH:D010523), disease (MESH:D004194), central nervous system metastases (MESH:D009362), acute leukemias (MESH:D015470), follicular lymphoma (MESH:D008224), lung cancer (MESH:D008175), leukemia (MESH:D007938), cholangiocarcinoma (MESH:D018281), multiple myeloma (MESH:D009101), pancreatic ductal adenocarcinoma (MESH:D021441), febrile neutropenia (MESH:D064147), infection (MESH:D007239), nausea (MESH:D009325), gastrointestinal toxicities (MESH:D005767), colorectal cancer (MESH:D015179), neuropathy (MESH:D009422), pancreatic adenocarcinoma (MESH:D010190), Hematologic (MESH:D006402), hyperkalemia (MESH:D006947), leukopenia (MESH:D007970), toxicities (MESH:D064420), MTD (MESH:D018149), QTc interval (OMIM:610141), hypokalemia (MESH:D007008), DDR (MESH:C537658), PD (MESH:D010300), anemia (MESH:D000740), neutropenia (MESH:D009503), QTc prolongation (MESH:D008133), alopecia (MESH:D000505), SD (MESH:D060050), mantle cell lymphoma (MESH:D020522), Cancer (MESH:D009369), lymphopenia (MESH:D008231), melanoma (MESH:D008545), acute lymphoblastic leukemia (MESH:D054198), vomiting (MESH:D014839), thrombocytopenia (MESH:D013921), inflammatory (MESH:D007249), DLT (MESH:D045745), hematological malignancies (MESH:D019337), MDS (MESH:D009190), diarrhea (MESH:D003967), colon adenocarcinoma (MESH:D003110), electrolyte abnormalities (MESH:D014883), lymphomas (MESH:D008223)
- **Chemicals:** purine nucleoside (MESH:D011684), Clofarabine (MESH:D000077866), Alexa-Fluor 568 (-), creatine (MESH:D003401), Alexa-Fluor 488 (MESH:C000711379), Alexa-Fluor 555 (MESH:C000608607), Alexa-Fluor 647 (MESH:C569686), fludarabine (MESH:C024352), bilirubin (MESH:D001663), H&amp;E (MESH:D006371), Bortezomib (MESH:D000069286), deoxyadenosine (MESH:C058118), PI (MESH:D010716), formalin (MESH:D005557), paraffin (MESH:D010232), creatinine (MESH:D003404), PD (MESH:D010165), Alexa-Fluor 750 (MESH:C502599), cladribine (MESH:D017338)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** HCT-116 — Homo sapiens (Human), Colon carcinoma, Cancer cell line (CVCL_0291), M14 — Homo sapiens (Human), Amelanotic melanoma, Cancer cell line (CVCL_1395), NCI-60 — Homo sapiens (Human), Lung small cell carcinoma, Cancer cell line (CVCL_A592)

## Full text

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## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12987827/full.md

## References

2 references — full list in the complete paper: https://tomesphere.com/paper/PMC12987827/full.md

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Source: https://tomesphere.com/paper/PMC12987827