# Artificial Intelligence Assisted Optimization of Ramaria obtusissima Extracts and Their Integrated Chemical and Biological Characterization

**Authors:** İskender Karaltı, Mustafa Sevindik, Ilgaz Akata

PMC · DOI: 10.3390/molecules31050870 · 2026-03-05

## TL;DR

This study uses artificial intelligence to optimize mushroom extracts, finding they have higher antioxidant and anticholinesterase effects compared to traditional methods.

## Contribution

AI-assisted optimization significantly enhances the biological activity and chemical profile of Ramaria obtusissima extracts.

## Key findings

- ANN-GA optimized extracts showed higher antioxidant activity with higher FRAP, TAS, and DPPH values.
- ANN-GA extracts exhibited stronger anticholinesterase activity with lower IC50 values for both enzymes.
- ANN-GA extracts contained higher levels of phenolic compounds like gallic acid and quercetin.

## Abstract

In this study, the biological activities of extracts obtained from Ramaria obtusissima were optimized using response surface methodology (RSM) and artificial neural networks-genetic algorithm (ANN-GA) approaches, and the chemical and biological profiles of the obtained extracts were evaluated with a holistic approach. Antioxidant potential was determined using FRAP, DPPH, TAS, TOS, and OSI parameters. It was found that the extract optimized with ANN-GA had significantly higher FRAP (242 ± 3 mg Trolox equivalent/g), TAS (6.64 ± 0.04 mmol/L), and DPPH (154 ± 3 mg Trolox equivalent/g) values compared to the RSM extract, while its OSI value was lower. Anticholinesterase activities were evaluated using IC50 values, and it was determined that the ANN-GA extract exhibited a stronger inhibitory effect on acetylcholinesterase (95 ± 2 µg/mL) and butyrylcholinesterase (125 ± 3 µg/mL) compared to the RSM extract. Antiproliferative effects were investigated in A549, MCF-7, and DU-145 cell lines, and a significant and dose-dependent suppression of cell proliferation was observed in all three cell lines, particularly at concentrations of 100 and 200 µg/mL. The chemical profile was determined using LC-MS/MS and GC-MS techniques. Higher levels of phenolic compounds such as gallic acid (6694.5 ± 4.9 mg/kg), caffeic acid (3374.8 ± 4.9 mg/kg), and quercetin (1563.1 ± 2.3 mg/kg) were found in the ANN-GA extract. GC-MS analyses showed that the ANN-GA extract has a richer lipophilic component profile in terms of biologically active fatty acids and ester derivatives. The findings reveal that AI-assisted optimization offers a powerful and effective approach to enhancing the biological efficacy of mushroom-derived natural products.

## Linked entities

- **Chemicals:** gallic acid (PubChem CID 370), caffeic acid (PubChem CID 689043), quercetin (PubChem CID 5280343)
- **Species:** Ramaria obtusissima (taxon 1484163)

## Full-text entities

- **Genes:** BCHE (butyrylcholinesterase) [NCBI Gene 590] {aka BCHED, CHE1, CHE2, E1}, ACHE (acetylcholinesterase (Yt blood group)) [NCBI Gene 43] {aka ACEE, ARACHE, N-ACHE, YT}
- **Chemicals:** caffeic acid (MESH:C040048), OSI (-), GA (MESH:D005708), gallic acid (MESH:D005707), fatty acids (MESH:D005227), DPPH (MESH:C004931), Trolox (MESH:C010643), quercetin (MESH:D011794), TAS (MESH:D013635)
- **Species:** Ramaria obtusissima (species) [taxon 1484163]

## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12986421/full.md

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Source: https://tomesphere.com/paper/PMC12986421