# Artificial Neural Network-Guided Discovery of Antioxidant Peptides from Peony (Paeonia ostii) Seed Meal: Peptidomics, Molecular Mechanism, and Cellular Validation

**Authors:** Tianrong Zhang, Xin Wang, Peng Ye, Yuhan Liu, Ming Zhao, Ziyan Liu, Yuan Zhao, Jinling Fan, Bin Zhang

PMC · DOI: 10.3390/ijms27052364 · 2026-03-03

## TL;DR

This study uses artificial neural networks to discover antioxidant peptides from peony seed meal, validating their activity and molecular mechanisms.

## Contribution

A novel ANN-guided workflow for discovering antioxidant peptides from underutilized plant by-products is presented.

## Key findings

- Neutrase hydrolysis optimized via ANN produced a hydrolysate with strong antioxidant activity.
- Four peptides (FRF, WQFR, FEFR, RWL) showed favorable binding to antioxidant targets and protected cells from oxidative damage.
- Molecular simulations confirmed stable interactions between peptides and Keap1.

## Abstract

Peony seed meal (PSM), a protein-rich by-product of oil extraction from Paeonia ostii, represents an underutilized resource with significant potential for functional ingredient development. In this study, an integrated strategy combining artificial neural network (ANN)-guided hydrolysis, peptidomics, molecular simulation, and cellular validation was employed to identify antioxidant peptides from PSM. Neutrase was selected as the optimal protease, and hydrolysis conditions were optimized using a backpropagation ANN model (R = 0.9935), yielding a hydrolysate with strong radical-scavenging activity (DPPH• IC50 = 0.30 mg/mL; ABTS•+ IC50 = 0.07 mg/mL). LC–MS/MS identified 364 peptides, predominantly low-molecular-weight sequences. In silico screening highlighted four candidates (FRF, WQFR, FEFR, and RWL) with favorable binding toward ABTS•+, DPPH•, and Keap1. Molecular docking and 100 ns molecular dynamics simulations confirmed stable peptide–Keap1 interactions, particularly for FRF. Cellular assays demonstrated that FRF and RWL significantly protected HepG2 cells against H2O2-induced oxidative damage by restoring antioxidant enzyme activities (SOD, CAT, and GSH-Px). Collectively, this study establishes a systematic workflow for discovering plant-derived antioxidant peptides and supports the sustainable valorization of PSM as a functional food ingredient.

## Linked entities

- **Proteins:** KEAP1 (kelch like ECH associated protein 1), SOD1 (superoxide dismutase 1), CAT (catalase), Gpx1 (glutathione peroxidase 1)
- **Chemicals:** H2O2 (PubChem CID 784), ABTS•+ (PubChem CID 35688)
- **Species:** Paeonia ostii (taxon 459177)

## Full-text entities

- **Chemicals:** PSM (-), ABTS + (MESH:C002502), H2O2 (MESH:D006861), oil (MESH:D009821), DPPH (MESH:C004931)
- **Species:** Paeonia ostii (species) [taxon 459177]

## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12986296/full.md

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Source: https://tomesphere.com/paper/PMC12986296