# Network Pharmacology and Molecular Docking Combined with In Vivo Validation to Elucidate the Molecular Mechanisms of Adenophorae Radix in Fracture Healing

**Authors:** Jiin Park, Jin Hee Kim, Eugene Huh, Minji Lee, Seungmin Lee, Yousuk Youn, Sangho Lee, Myung Sook Oh

PMC · DOI: 10.3390/ijms27052413 · 2026-03-05

## TL;DR

This study explores how Adenophorae Radix helps heal bone fractures by identifying its active compounds and their effects on bone regeneration processes.

## Contribution

The study combines network pharmacology, molecular docking, and in vivo experiments to reveal the multi-target mechanisms of Adenophorae Radix in fracture healing.

## Key findings

- Short-term AR treatment increased osteogenic markers RUNX2 and osteocalcin in bone marrow.
- Long-term AR administration improved bone mineral density and callus maturation in fractured femurs.
- Key compounds like cycloartenol acetate and β-sitosterol target HIF1A, PTGS2, and PPARG pathways involved in bone healing.

## Abstract

Fracture healing is a multistage regenerative process requiring the coordinated regulation of inflammation, osteogenesis, and bone remodeling, yet pharmacological agents that effectively modulate these processes remain limited. Adenophorae Radix (AR), a traditional medicinal herb used for tissue repair, has not been mechanistically investigated in skeletal regeneration. In this study, a mouse femoral fracture model was employed to evaluate the effects of short-term (7 days) and long-term (5 weeks) oral administration of AR. Bone regeneration was assessed using micro-computed tomography, histological staining, and quantitative real-time polymerase chain reaction. Network pharmacology and molecular docking were applied to predict bioactive AR constituents and their target pathways, followed by in vivo validation. Short-term AR treatment significantly upregulated osteogenic markers, including RUNX2 and osteocalcin, in the bone marrow, indicating early activation of osteoblast differentiation. Long-term administration enhanced bone mineral density, trabecular organization, and callus maturation. Network pharmacology analysis identified cycloartenol acetate, β-sitosterol, and mandenol as major active compounds targeting osteogenesis- and osteoclast-related pathways, converging on HIF1A, PTGS2, and PPARG. Molecular docking demonstrated strong binding affinities between these compounds and their predicted targets, which was supported by increased expression of HIF1A, PTGS2, and PPARG in AR-treated femora. Collectively, these findings suggest that AR promotes fracture healing by regulating osteogenic differentiation and bone remodeling through multi-target transcriptional networks.

## Linked entities

- **Genes:** RUNX2 (RUNX family transcription factor 2) [NCBI Gene 860], HIF1A (hypoxia inducible factor 1 subunit alpha) [NCBI Gene 3091], PTGS2 (prostaglandin-endoperoxide synthase 2) [NCBI Gene 5743], PPARG (peroxisome proliferator activated receptor gamma) [NCBI Gene 5468]
- **Proteins:** bglap2 (bone gamma-carboxyglutamate (gla) protein (osteocalcin) 2)
- **Chemicals:** cycloartenol acetate (PubChem CID 13023741), β-sitosterol (PubChem CID 222284), mandenol (PubChem CID 5282184)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Hif1a (hypoxia inducible factor 1, alpha subunit) [NCBI Gene 15251] {aka HIF-1-alpha, HIF1-alpha, HIF1alpha, MOP1, bHLHe78}, Pparg (peroxisome proliferator activated receptor gamma) [NCBI Gene 19016] {aka Nr1c3, PPAR-gamma, PPAR-gamma2, PPARgamma, PPARgamma2}, Runx2 (runt related transcription factor 2) [NCBI Gene 12393] {aka AML3, CBF-alpha-1, Cbf, Cbfa-1, Cbfa1, LS3}, Bglap2 (bone gamma-carboxyglutamate protein 2) [NCBI Gene 12097] {aka BGP2, Bglap1, Bgp, Og2, mOC-B}, Ptgs2 (prostaglandin-endoperoxide synthase 2) [NCBI Gene 19225] {aka COX2, Cox-2, PES-2, PGHS-2, PHS II, PHS-2}
- **Diseases:** Fracture (MESH:D050723), inflammation (MESH:D007249), femoral fracture (MESH:D005264)
- **Chemicals:** mandenol (MESH:C007678), Adenophorae (-), beta-sitosterol (MESH:C025473)
- **Species:** Mus musculus (house mouse, species) [taxon 10090]

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12986031/full.md

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Source: https://tomesphere.com/paper/PMC12986031