# Cytokines, Signaling and Epigenetic Mechanisms: Shaping the Acute Lymphoblastic Leukemia Microenvironment

**Authors:** Carolina Simioni, Luca Maria Neri

PMC · DOI: 10.3390/cells15050467 · Cells · 2026-03-05

## TL;DR

This review explores how cytokines, signaling pathways, and epigenetic changes shape the environment in which acute lymphoblastic leukemia develops and resists treatment.

## Contribution

The paper provides a comprehensive analysis of the interplay between cytokines, signaling pathways, and epigenetics in the ALL microenvironment.

## Key findings

- Cytokines like IL-6, TNF-α, and CXCL12 are key mediators of leukemia niche remodeling.
- Signaling pathways such as Wnt/β-catenin and JAK/STAT are functionally interconnected with the tumor microenvironment.
- Epigenetic mechanisms regulate leukemia's dependence on stromal and inflammatory signals.

## Abstract

Acute Lymphoblastic Leukemia (ALL) is a heterogeneous hematological malignancy in which disease progression and response to therapy are influenced by a complex network of molecular alterations, interactions with the bone marrow microenvironment, and epigenetic modulation mechanisms. Crosstalk between oncogenic, inflammatory, and immunoregulatory signaling pathways, together with epigenetic modifications, contributes to the maintenance of leukemic survival and the development of therapeutic resistance. This review analyzes the role of cytokines and chemokines such as IL-6, TNF-α, and CXCL12, which act as biological biomarkers and key mediators of leukemia niche remodeling, and the main signaling pathways involved in ALL, such as Wnt/β-catenin, JAK/STAT, PI3K/AKT/mTOR, Notch, and BCR, highlighting their functional interconnection with the tumor microenvironment. The role of epigenetics in modulating the dialogue between leukemia cells and stromal components is also discussed. Epigenetic programs govern leukemia’s dependence on stromal support, inflammatory and niche-derived signals, as well as the microenvironment signaling pathways. Overall, targeting leukemia-niche interactions is a crucial strategy for improving outcomes in ALL and to identify potential molecular vulnerabilities, also for developing new therapeutic approaches for the treatment of the disease.

## Linked entities

- **Proteins:** IL6 (interleukin 6), TNF (tumor necrosis factor), CXCL12 (C-X-C motif chemokine ligand 12), ctnnb1.S (catenin beta 1 S homeolog), jak (Janus kinase), SOAT1 (sterol O-acyltransferase 1), PIK3CA (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha), AKT1 (AKT serine/threonine kinase 1), MTOR (mechanistic target of rapamycin kinase), Notch (neurogenic locus notch homolog), BCR (BCR activator of RhoGEF and GTPase)
- **Diseases:** Acute Lymphoblastic Leukemia (MONDO:0004967), ALL (MONDO:0004967)

## Full-text entities

- **Genes:** AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 2475] {aka FRAP, FRAP1, FRAP2, RAFT1, RAPT1, SKS}, CTNNB1 (catenin beta 1) [NCBI Gene 1499] {aka CTNNB, EVR7, MRD19, NEDSDV, armadillo}, BCR (BCR activator of RhoGEF and GTPase) [NCBI Gene 613] {aka ALL, BCR1, CML, D22S11, D22S662, PHL}, CXCL12 (C-X-C motif chemokine ligand 12) [NCBI Gene 6387] {aka IRH, PBSF, SCYB12, SDF1, TLSF, TPAR1}, PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 5291] {aka P110BETA, PI3K, PI3KBETA, PIK3C1}
- **Diseases:** leukemia (MESH:D007938), tumor (MESH:D009369), hematological malignancy (MESH:D019337), inflammatory (MESH:D007249), ALL (MESH:D054198)

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12985215/full.md

## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12985215/full.md

## References

151 references — full list in the complete paper: https://tomesphere.com/paper/PMC12985215/full.md

---
Source: https://tomesphere.com/paper/PMC12985215