# Proteomic trajectories in human rotator cuff degeneration: a systematic review of immunohistochemical studies

**Authors:** Dave Osinachukwu Duru, Andrew Kailin Zhou, Patrick J. Carroll, Amr Elmaraghy

PMC · DOI: 10.1186/s13018-026-06735-1 · 2026-02-09

## TL;DR

This review summarizes how protein patterns in rotator cuff tissue change with disease severity, suggesting potential targets for treatment.

## Contribution

The study is the first to synthesize immunohistochemical findings across stages of human rotator cuff degeneration.

## Key findings

- Early tears show hypoxic-inflammatory markers with preserved regenerative potential.
- Later stages show fibrofatty infiltration and loss of anabolic factors.
- Comorbidities like diabetes amplify inflammatory and adipogenic signals.

## Abstract

Rotator cuff (RC) repairs heal unreliably, particularly in chronic disease. The molecular mechanisms underlying failed repair remain poorly understood. While individual studies have examined protein expression in diseased RC tissue, no synthesis has investigated these findings across various disease stages. This systematic review explores the stage-specific protein expression of human RC degeneration using immunohistochemistry.

Following PRISMA guidelines, MEDLINE, Embase, and Cochrane Library were systematically searched to September 2025 for human studies that use immunohistochemistry to evaluate protein expression in intraoperative RC tendon or muscle biopsies. Study quality was appraised with Joanna Briggs Institute (JBI) tools. No meta-analysis was performed due to heterogeneity.

Forty-seven studies were included. Despite methodological heterogeneity, convergent molecular patterns emerged within disease stages. Partial and small tears demonstrated hypoxic-inflammatory-apoptotic signatures (HIF-1α, BNip3, IL-6, IL-1β, MMP-1/3/9) with preserved regenerative markers (Ki67, CD34), suggesting reparative potential. Medium tears exhibited sustained angiogenic activity (VEGF) and emerging adipogenic drift (PPARγ, C/EBPα). Large and massive tears showed depletion of anabolic factors (TGF-β1, BMP-5), M2-macrophage predominance (CD206, CD163), and fibrofatty infiltration. Patient comorbidities (diabetes, vitamin D deficiency, smoking) amplified inflammatory and adipogenic signatures.

Cross-sectional human immunohistochemical evidence infers a stage-associated molecular trajectory: inflammatory-hypoxic stress with retained reparative capacity at earlier disease stages to fibrotic–adipogenic failure at later stages. This molecular framework may support future approaches to surgical decision-making and precision therapies.

The online version contains supplementary material available at 10.1186/s13018-026-06735-1.

## Linked entities

- **Genes:** HIF1A (hypoxia inducible factor 1 subunit alpha) [NCBI Gene 3091], BNIP3 (BCL2 interacting protein 3) [NCBI Gene 664], IL6 (interleukin 6) [NCBI Gene 3569], IL1B (interleukin 1 beta) [NCBI Gene 3553], MMP1 (matrix metallopeptidase 1) [NCBI Gene 4312], MMP3 (matrix metallopeptidase 3) [NCBI Gene 4314], MMP9 (matrix metallopeptidase 9) [NCBI Gene 4318], Mki67 (antigen identified by monoclonal antibody Ki 67) [NCBI Gene 17345], CD34 (CD34 molecule) [NCBI Gene 947], VEGFA (vascular endothelial growth factor A) [NCBI Gene 7422], PPARG (peroxisome proliferator activated receptor gamma) [NCBI Gene 5468], CEBPA (CCAAT enhancer binding protein alpha) [NCBI Gene 1050], TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040], BMP5 (bone morphogenetic protein 5) [NCBI Gene 653], MRC1 (mannose receptor C-type 1) [NCBI Gene 4360], CD163 (CD163 molecule) [NCBI Gene 9332]
- **Diseases:** diabetes (MONDO:0005015)

## Full-text entities

- **Genes:** HIF1A (hypoxia inducible factor 1 subunit alpha) [NCBI Gene 3091] {aka HIF-1-alpha, HIF-1A, HIF-1alpha, HIF1, HIF1-ALPHA, MOP1}, CD163 (CD163 molecule) [NCBI Gene 9332] {aka M130, MM130, SCARI1}, BMP5 (bone morphogenetic protein 5) [NCBI Gene 653], IL1B (interleukin 1 beta) [NCBI Gene 3553] {aka IL-1, IL1-BETA, IL1F2, IL1beta}, TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}, CEBPA (CCAAT enhancer binding protein alpha) [NCBI Gene 1050] {aka C/EBP-alpha, CEBP}, BNIP3 (BCL2 interacting protein 3) [NCBI Gene 664] {aka HABON, NIP3}, IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, CD34 (CD34 molecule) [NCBI Gene 947], MRC1 (mannose receptor C-type 1) [NCBI Gene 4360] {aka CD206, CLEC13D, CLEC13DL, MMR, MRC1L1, bA541I19.1}, VEGFA (vascular endothelial growth factor A) [NCBI Gene 7422] {aka L-VEGF, MVCD1, VEGF, VPF}, PPARG (peroxisome proliferator activated receptor gamma) [NCBI Gene 5468] {aka CIMT1, FPLD3, GLM1, NR1C3, PPARG1, PPARG2}
- **Diseases:** RC degeneration (MESH:D000070636), hypoxic (MESH:D002534), vitamin D deficiency (MESH:D014808), diabetes (MESH:D003920), inflammatory (MESH:D007249), smoking (MESH:D015208)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12983771/full.md

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Source: https://tomesphere.com/paper/PMC12983771