# Draft genome sequence of Denitratisoma sp. strain agr-D3, isolated from common reed using a droplet-based cultivation method

**Authors:** Tomoki Iwashita, Manabu Kanno, Yuri Ota, Satoko Matsukura, Masamune Morita, Akira Sasaki, Naohiro Noda, Tomoki Nishioka, Yuga Hirakata, Hideyuki Tamaki

PMC · DOI: 10.1128/mra.01012-25 · 2026-02-09

## TL;DR

This paper presents the draft genome of a newly isolated Denitratisoma strain from common reed using a droplet-based cultivation method.

## Contribution

The novel contribution is the draft genome sequence of Denitratisoma sp. strain agr-D3, isolated using an innovative cultivation method.

## Key findings

- The draft genome is 3,082,957 bp in size with a G + C content of 63.6%.
- The genome contains 2,914 predicted coding sequences and 4 rRNA genes.

## Abstract

We report the draft genome sequence of Denitratisoma sp. strain agr-D3, isolated from common reed using a droplet-based cultivation method. The draft genome is 3,082,957 bp with a G + C content of 63.6%. The genome was predicted to contain 2,914 coding sequences and 4 rRNA genes.

## Full-text entities

- **Species:** Denitratisoma sp. (species) [taxon 1978352], Phragmites australis (common reed, species) [taxon 29695]

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Source: https://tomesphere.com/paper/PMC12981118