# Machine learning for microscopy data analytics targeting real-time optical characterization of semiconductor nanocrystals

**Authors:** Amitrajit Mukherjee, Robby Reynaerts, Bapi Pradhan, Sudipta Seth, Andreas T. Rösch, Tamali Banerjee, Lata Chouhan, Handong Jin, Christian Sternemann, Michael Paulus, Luca Leoncino, Kunal S. Mali, Steven De Feyter, Maarten B. J. Roeffaers, E. W. Meijer, Johan Hofkens, Elke Debroye

PMC · DOI: 10.1038/s41467-026-68939-7 · Nature Communications · 2026-02-04

## TL;DR

This paper introduces a machine learning method to analyze blinking patterns in semiconductor nanocrystals for real-time optical characterization.

## Contribution

A novel unsupervised machine learning module is introduced for clustering blinking patterns and computing power spectral densities in real-time.

## Key findings

- The UML-PSD methodology enables near-real-time clustering of high-dimensional blinking patterns.
- Category-wise power spectral densities reveal insights into active trap states in semiconductor nanocrystals.
- Data preprocessing significantly impacts clustering performance in the proposed framework.

## Abstract

Semiconductor nanocrystals with uniform morphology and composition are expected to show consistent responses during light-matter interactions. However, microscopy reveals significant variations in their photoluminescence blinking patterns, even under identical experimental conditions. This discrepancy arises from differences in crystal defects and nonradiative trap states. As a result, heterogeneous blinking patterns serve as valuable indicator of material quality, uncovering several concealed features through statistical analysis of large datasets. Nonetheless, efficient segregation and analysis of numerous blinking trajectories remain a challenge due to laborious calculations, computational bottlenecks, and manual intervention. In this study, we introduce a robust unsupervised machine learning (UML) assisted module to cluster high-dimensional blinking patterns in near-real-time, while calculating category-wise power spectral densities (PSD) to investigate active traps. Furthermore, we explore the impact of data preprocessing on clustering performance. The ‘clustering-segregation-analysis’ (UML-PSD) methodology demonstrates versatility, paving a way to advance contemporary (micro)spectroscopy, specifically for rapid and cost-effective optical characterization of semiconductor nanocrystals.

The authors introduce an unsupervised machine learning module capable of clustering high-dimensional blinking patterns and computing class-wise power spectral densities to probe active trap states. The approach offers advances in contemporary (micro)spectroscopy.

## Full-text entities

- **Genes:** STS (steroid sulfatase) [NCBI Gene 412] {aka ARSC, ARSC1, ASC, ES, SSDD, XLI}
- **Diseases:** PSD (MESH:D001851), SSD (MESH:C563928), UML (MESH:D007859), SAMNs (MESH:C564991), SS (MESH:C000721350)
- **Chemicals:** ACN (MESH:C084683), hexane (MESH:D006586), N2 (MESH:D009584), 1,12-diaminododecane (MESH:C016417), Ar (MESH:D001128), phenacyl bromide (MESH:C013190), TOPO (MESH:C044965), NaOH (MESH:D012972), EM (MESH:D004961), H2O (MESH:D014867), Cl (MESH:D002713), 1-octadecene (MESH:C109760), methyl acetate (MESH:C046923), DDAB (MESH:C046112), OAm (MESH:C008703), OA (MESH:D019301), hydrochloric acid (MESH:D006851), chloroform (MESH:D002725), lead oxide (MESH:C047365), toluene (MESH:D014050), ice (MESH:D007053), ethanol (MESH:D000431), DMSO (MESH:D004121), 1,3-diaminopropane (MESH:C009475), 1,4,5,8-naphthalenetetracarboxylic dianhydride (MESH:C110449), Alkyl-NDI SAMNs (-), acetonitrile (MESH:C032159), CsBr (MESH:C078556), carboxylic acid (MESH:D002264)

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12979611/full.md

## References

10 references — full list in the complete paper: https://tomesphere.com/paper/PMC12979611/full.md

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Source: https://tomesphere.com/paper/PMC12979611