# Cytoskeletal remodeling promotes tunneling nanotube formation and drives cardiac resident cell mitochondrial transfer in sepsis

**Authors:** Rui Song, Cheng Huang, Yinrui Ma, Zhenhua Zhang, Yifei Liu, Bing Chen, Xi Zhang, Shuai Hao, He Huang, Milad Ashrafizadeh, João Conde, Chenyang Duan

PMC · DOI: 10.1126/sciadv.adz3266 · 2026-03-11

## TL;DR

The paper shows how cytoskeletal changes in heart cells during sepsis lead to the formation of nanotubes that transfer mitochondria, offering new insights into cardiac dysfunction and potential treatments.

## Contribution

The study reveals Drp1-driven cytoskeletal remodeling as a novel mechanism for tunneling nanotube formation and mitochondrial transfer in septic cardiac cells.

## Key findings

- Sepsis reprograms cardiac endothelial cells, fibroblasts, and macrophages, leading to mitochondrial dysfunction.
- Drp1 interacts with Filamin and Kinesin to regulate tunneling nanotube formation and mitochondrial transfer.
- Cardiac-specific Drp1 knockout halts metabolic deterioration and reverses cellular reprogramming in sepsis.

## Abstract

Sepsis-induced cardiac dysfunction arises from complex intercellular communication networks that extend beyond direct cardiomyocyte damage, yet the nanoscale mechanisms governing these interactions remain poorly understood. Here, we identify tunneling nanotubes (TNTs) as dynamic biological nanostructures facilitating intercellular mitochondrial transfer, revealing their critical role in septic cardiac remodeling. Using a murine cecal ligation and puncture (CLP) model and single-cell RNA sequencing, we demonstrate that sepsis reprograms cardiac endothelial cells, fibroblasts, and macrophages, generating metabolically impaired subpopulations with dysfunctional mitochondrial respiration. We uncover a Drp1-driven cytoskeletal remodeling process that orchestrates TNT biogenesis, wherein Drp1 interacts with Filamin and Kinesin to regulate TNT formation and extension, enabling long-range organelle trafficking. Cardiac-specific Drp1 knockout disrupts TNT-mediated mitochondrial exchange, halting metabolic deterioration and reversing cellular reprogramming. These findings establish Drp1-mediated TNT networks as nanoscale conduits of organelle communication, offering insights into biological nanotube engineering, cellular-scale nanotechnology, and potential therapeutic interventions for mitochondrial dysfunction in sepsis.

Cytoskeletal remodeling by Drp1 promotes nanotube formation and mitochondrial transfer in septic hearts.

## Linked entities

- **Genes:** CRMP1 (collapsin response mediator protein 1) [NCBI Gene 1400], cher (cheerio) [NCBI Gene 42066], Khc (Kinesin heavy chain) [NCBI Gene 36810]
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Klf4 (Kruppel-like transcription factor 4 (gut)) [NCBI Gene 16600] {aka EZF, Gklf, Zie}, Lcn2 (lipocalin 2) [NCBI Gene 16819] {aka 24p3, NRL, Sip24}, Zfhx3 (zinc finger homeobox 3) [NCBI Gene 11906] {aka A230102L03Rik, Atbf1, Sci, WBP9, mKIAA4228}, Itpr3 (inositol 1,4,5-triphosphate receptor 3) [NCBI Gene 16440] {aka IP3R 3, IP3R-3, Ip3r3, Itpr-3, tf}, Nfic (nuclear factor I/C) [NCBI Gene 18029] {aka 1110019L22Rik, 1500041O16Rik, NF1-C}, Tbx3 (T-box 3) [NCBI Gene 21386] {aka D5Ertd189e}, Stat3 (signal transducer and activator of transcription 3) [NCBI Gene 20848] {aka 1110034C02Rik, Aprf}, Myc (Myc proto-oncogene, bHLH transcription factor) [NCBI Gene 17869] {aka Myc2, Niard, Nird, bHLHe39}, Rel (Rel proto-oncogene, NFKB subunit) [NCBI Gene 19696] {aka c-Rel}, Klf5 (Kruppel-like transcription factor 5) [NCBI Gene 12224] {aka 4930520J07Rik, Bteb2, CKLF, IKLF}, Cxcl15 (C-X-C motif chemokine ligand 15) [NCBI Gene 20309] {aka Il8, Scyb15, lungkine, weche}, Pdgfrb (platelet derived growth factor receptor, beta polypeptide) [NCBI Gene 18596] {aka CD140b, PDGFR-1, Pdgfr}, Maf (MAF bZIP transcription factor) [NCBI Gene 17132] {aka 2810401A20Rik, A230108G15Rik, c-maf}, TNNT1 (troponin T1, slow skeletal type) [NCBI Gene 7138] {aka ANM, NEM5, STNT, TNT, TNTS}, Jdp2 (Jun dimerization protein 2) [NCBI Gene 81703] {aka Jundm2, Jundp2, TIF}, Cebpa (CCAAT/enhancer binding protein alpha) [NCBI Gene 12606] {aka C/ebpalpha, CBF-A, Cebp}, Pecam1 (platelet/endothelial cell adhesion molecule 1) [NCBI Gene 18613] {aka Cd31, PECAM-1, Pecam}, Ly6c1 (lymphocyte antigen 6 family member C1) [NCBI Gene 17067] {aka Ly-6C, Ly-6C1, Ly6c}, Dkk3 (dickkopf WNT signaling pathway inhibitor 3) [NCBI Gene 50781] {aka dkk-3, mDkk-3}, Tfec (transcription factor EC) [NCBI Gene 21426] {aka Tcfec, bHLHe34}, Fosb (Fos B proto-oncogene, AP-1 transcription factor subunit) [NCBI Gene 14282], Igh-V7183 (immunoglobulin heavy chain (V7183 family)) [NCBI Gene 16059] {aka B9-scFv, IgG, IgH, IgVH1(VSG), VH7183, VI24H}, Tomm20 (translocase of outer mitochondrial membrane 20) [NCBI Gene 67952] {aka 1810060K07Rik, Gm19268, MAS20, MOM19, TOM20, mKIAA0016}, Zfp467 (zinc finger protein 467) [NCBI Gene 68910] {aka 1190001I08Rik, EZI, MNCb-3350, Znf467}, Foxn3 (forkhead box N3) [NCBI Gene 71375] {aka 5430426H20Rik, Ches1, Ches1l, HTLFL1}, Dnm1l (dynamin 1-like) [NCBI Gene 74006] {aka 6330417M19Rik, Dlp1, Dnmlp1, Drp1, python}, Dnase1 (deoxyribonuclease I) [NCBI Gene 13419] {aka DNaseI, Dnl1}, Tnf (tumor necrosis factor) [NCBI Gene 21926] {aka DIF, TNF-a, TNF-alpha, TNFSF2, TNFalpha, Tnfa}, Ccr2 (C-C motif chemokine receptor 2) [NCBI Gene 12772] {aka Cc-ckr-2, Ccr2a, Ccr2b, Ckr2, Ckr2a, Ckr2b}, Birc3 (baculoviral IAP repeat-containing 3) [NCBI Gene 11796] {aka Api1, Api2, C-IAP2, HIAP2, IAP1, IAP2}, Relb (Relb proto-oncogene, NFKB subunit) [NCBI Gene 19698] {aka shep}, Nlrp3 (NLR family, pyrin domain containing 3) [NCBI Gene 216799] {aka AGTAVPRL, AII/AVP, Cias1, FCAS, FCU, MWS}, Cxcl2 (C-X-C motif chemokine ligand 2) [NCBI Gene 20310] {aka CINC-2a, GROb, Gro2, MIP-2, MIP-2a, Mgsa-b}, Cdc42 (cell division cycle 42) [NCBI Gene 12540], Nfe2 (nuclear factor, erythroid derived 2) [NCBI Gene 18022] {aka NF-E2, NF-E2/P45, p45, p45NFE2, p45nf-e2}, Tnnt1 (troponin T1, skeletal, slow) [NCBI Gene 21955] {aka Tnt, sTnT, ssTnT}, Bhlhe40 (basic helix-loop-helix family, member e40) [NCBI Gene 20893] {aka Bhlhb2, C130042M06Rik, CR8, Clast5, Dec1, Sharp2}, Myh6 (myosin, heavy polypeptide 6, cardiac muscle, alpha) [NCBI Gene 17888] {aka A830009F23Rik, Myhc-a, Myhca, alpha-MHC, alphaMHC}, Klf6 (Kruppel-like transcription factor 6) [NCBI Gene 23849] {aka BCD1, CPBP, Copeb, FM2, FM6, Ierepo1}, Cldn5 (claudin 5) [NCBI Gene 12741] {aka MBEC1, Tmvcf}, Actb (actin, beta) [NCBI Gene 11461] {aka Actx, E430023M04Rik, beta-actin}, Hivep2 (human immunodeficiency virus type I enhancer binding protein 2) [NCBI Gene 15273] {aka Gm20114, MIBP-1, MIBP1, Schnurri-2, Shn-2}, Il6 (interleukin 6) [NCBI Gene 16193] {aka Il-6}, Xbp1 (X-box binding protein 1) [NCBI Gene 22433] {aka D11Ertd39e, TREB-5, TREB5, XBP-1}, Nfkb2 (nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100) [NCBI Gene 18034] {aka NF-kappaB2, lyt, p49, p49/p100, p50B, p52}, Irf2 (interferon regulatory factor 2) [NCBI Gene 16363] {aka 9830146E22Rik, Irf-2}, Car2 (carbonic anhydrase 2) [NCBI Gene 12349] {aka CAII, Ca2, Car-2, Ltw-5, Lvtw-5}, Fdxr (ferredoxin reductase) [NCBI Gene 14149] {aka AR}, Fmo2 (flavin containing monooxygenase 2) [NCBI Gene 55990] {aka 2310008D08Rik, 2310042I22Rik}, Zbtb7b (zinc finger and BTB domain containing 7B) [NCBI Gene 22724] {aka Thpok, Zfp67, c-Krox}, Runx3 (runt related transcription factor 3) [NCBI Gene 12399] {aka AML2, Cbfa3, Pebp2a3, Rx3}, Aqp7 (aquaporin 7) [NCBI Gene 11832] {aka AQP7L, AQPap}, Il1b (interleukin 1 beta) [NCBI Gene 16176] {aka IL-1beta, Il-1b}, Crmp1 (collapsin response mediator protein 1) [NCBI Gene 12933] {aka CRMP-1, DRP-1, Dpysl1, ULIP-3, Ulip3}, Gsn (gelsolin) [NCBI Gene 227753] {aka ADF}, Foxp2 (forkhead box P2) [NCBI Gene 114142] {aka 2810043D05Rik, CAG-16, D0Kist7}, Prdm1 (PR domain containing 1, with ZNF domain) [NCBI Gene 12142] {aka Blimp-1, Blimp1, PRDI-BF1, ZNFPR1A1, b2b1765Clo}, Nfkb1 (nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105) [NCBI Gene 18033] {aka NF-KB1, NF-kappaB, NF-kappaB1, p105, p50, p50/p105}, Fosl1 (fos-like antigen 1) [NCBI Gene 14283] {aka Fra1, fra-1}, Cebpe (CCAAT/enhancer binding protein epsilon) [NCBI Gene 110794] {aka C/EBPe, C/EBPepsilon, CRP1, Gm294}
- **Diseases:** CF (MESH:D006331), remodeling (MESH:D020257), abdominal infection (MESH:D000007), organ damage (MESH:D000092124), heart failure (MESH:D006333), neuronal damage (MESH:D009410), fraction (MESH:D054144), CLP (MESH:D002429), Sepsis (MESH:D018805), septic (MESH:D001170), UMAP (MESH:C567162), septic shock (MESH:D012772), death (MESH:D003643), metastasis (MESH:D009362), coagulation dysfunction (MESH:D001778), infection (MESH:D007239), acute kidney injury (MESH:D058186), myocardial injury (MESH:D009202), TNTs (MESH:D020425), hemorrhage (MESH:D006470), organ dysfunction (MESH:D009102), arrhythmia (MESH:D001145), hypoxia (MESH:D000860), cardiomyocyte damage (MESH:D020263), metabolic abnormalities (MESH:D008659), hypotension (MESH:D007022), ischemia (MESH:D007511), mitochondrial damage (MESH:D028361), inflammation (MESH:D007249), neurodegenerative diseases (MESH:D019636), edema (MESH:D004487), tumor (MESH:D009369), multiple (MESH:D009104)
- **Chemicals:** paraformaldehyde (MESH:C003043), LPS (MESH:D008070), Antimycin A (MESH:D000968), CO2 (MESH:D002245), glutathione (MESH:D005978), rotenone (MESH:D012402), ROS (MESH:D017382), calcium (MESH:D002118), 4',6-diamidino-2-phenylindole (MESH:C007293), polyvinylidene difluoride (MESH:C024865), PBS (MESH:D007854), eosin (MESH:D004801), buprenorphine (MESH:D002047), glutaraldehyde (MESH:D005976), Hematoxylin (MESH:D006416), penicillin (MESH:D010406), proton (MESH:D011522), sodium citrate (MESH:D000077559), H&amp;E (MESH:D006371), DMEM (-), tert-butanol (MESH:D020002), fatty acid (MESH:D005227), uranium acetate (MESH:C005460), GSSG (MESH:D019803), Hoechst 33342 (MESH:C017807), DCFH-DA (MESH:C029569), isoflurane (MESH:D007530), Carbonyl cyanide p-trifluoromethoxyphenylhydrazone (MESH:D002259), malate (MESH:C030298), ethanol (MESH:D000431), glutamate (MESH:D018698), SDS (MESH:D012967), ascorbate (MESH:D001205), osmium tetroxide (MESH:D009993), O2 (MESH:D010100), phosphate (MESH:D010710), paraffin (MESH:D010232), Succinate (MESH:D019802), isocyanate (MESH:D017953), pyruvate (MESH:D019289), Calcein-AM (MESH:C085925), Metal (MESH:D008670), pentobarbital sodium (MESH:D010424), polyacrylamide (MESH:C016679), streptomycin (MESH:D013307), 2',7'-dichlorodihydrofluorescein diacetate (MESH:C110400), ADP (MESH:D000244), nitrogen (MESH:D009584)
- **Species:** Homo sapiens (human, species) [taxon 9606], Adeno-associated virus (species) [taxon 272636], Mus musculus (house mouse, species) [taxon 10090]
- **Mutations:** S30033S, C in 0
- **Cell lines:** Endo — Mus musculus (Mouse), Finite cell line (CVCL_1E64), C57BL/6J — Mus musculus (Mouse), Transformed cell line (CVCL_C0MW), C57BL/6 — Mus musculus (Mouse), Transformed cell line (CVCL_C0MU), GRCm38 — Mus musculus (Mouse), Hybridoma (CVCL_J877), VEC — Homo sapiens (Human), Embryonic stem cell (CVCL_A4WB), XF — Xenopus laevis (African clawed frog), Spontaneously immortalized cell line (CVCL_6E64)

## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12978241/full.md

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Source: https://tomesphere.com/paper/PMC12978241