# Can ferric-oxyl excited states explain elongated iron-oxygen bonds in heme peroxidase catalytic intermediates?

**Authors:** Lewis J. Williams, Jos J.A.G. Kamps, Adrian M. V. Brânzanic, Maria Lehene, Kristoffer J. M. Lundgren, Ulf Ryde, Kuntal Chatterjee, Margaret D. Doyle, Philipp S. Simon, Hiroki Makita, Amy J. Thompson, Aaron S. Brewster, Tiankun Zhou, Marina Lučić, Michael T. Wilson, Pierre Aller, Juan Sanchez-Weatherby, Leland Gee, Sebastian Dehe, Sandra Mous, Junko Yano, Vittal K. Yachandra, Michael A. Hough, Allen M. Orville, Jan F. Kern, Radu L. Silaghi-Dumitrescu, Jonathan A. R. Worrall

PMC · DOI: 10.1038/s41467-026-69192-8 · 2026-02-03

## TL;DR

This study reveals that ferric-oxyl excited states, not typical ferryl intermediates, explain elongated iron-oxygen bonds in peroxidase enzymes.

## Contribution

The study introduces the concept of ferric-oxyl excited states as an explanation for observed bond characteristics in heme peroxidases.

## Key findings

- Ferryl intermediates in peroxidases have single, not double, iron-oxygen bond character.
- Ferric-oxyl (FeIII–O•–) excited states explain the observed bond elongation in catalytic intermediates.
- Quantum calculations and X-ray data support the existence of these excited states.

## Abstract

The use of X-ray structures to determine and interpret the ferryl iron-oxygen bond order in molecular oxygen-activating heme enzymes has, in the past, been controversial. This has mainly stemmed from the susceptibility of ferryl species to X-ray-induced electronic state changes. In this work we establishe using time-resolved serial femtosecond X-ray crystallography (tr-SFX) on a dye-decolourising peroxidase that the ferryl intermediate species (Compounds I and II) captured following in situ mixing of microcrystals with H2O2 have single, rather than the double bond character expected. X-ray emission validated tr-SFX data with quantum refinement, time-dependent-DFT calculations and QM/MM geometry optimizations together support the concept that the single iron-oxygen bond character is not an indication of ferryl reduction or a protonated form (FeIV-OH) but is instead attributed to the existence of accessible excited states possessing ferric-oxyl (FeIII–O•–) character. Such states offer insight into the nature of ferryl heme.

Peroxidases have long been considered to use ferryl heme intermediates (Fe(IV) = O) to catalyze oxidative chemistries. Here, Williams et al. find that ferric-oxyl (FeIII–O•–) excited states exist along the catalytic reaction coordinate of a peroxidase.

## Linked entities

- **Chemicals:** H2O2 (PubChem CID 784)

## Full-text entities

- **Chemicals:** FeIII-O (-), heme (MESH:D006418), iron (MESH:D007501), oxygen (MESH:D010100), H2O2 (MESH:D006861)

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12976261/full.md

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Source: https://tomesphere.com/paper/PMC12976261