# Covariation between air chiller and chicken product microbiota in a poultry processing facility

**Authors:** Birgitte Moen, Annette Fagerlund, Sophie Marie Pursti, Merete Rusås Jensen, Solveig Langsrud

PMC · DOI: 10.1371/journal.pone.0344423 · 2026-03-10

## TL;DR

This study shows how the air chiller in poultry processing influences the microbial makeup of chicken products, suggesting ways to reduce spoilage.

## Contribution

The study identifies the air chiller as a critical source of microbial contamination and proposes targeted interventions to reduce spoilage risks.

## Key findings

- Bacterial loads on air chiller swabs and fresh products were higher during late shifts on Thursdays compared to Mondays.
- Chicken legs and breast fillets showed distinct spoilage microbiota at end-of-shelf-life.
- Air chiller microbiota was dominated by Acinetobacter, Psychrobacter, and Pseudomonas.

## Abstract

Chicken products are prone to microbial spoilage, and early detection of deviations in contaminating microbiota can improve quality while reducing waste and customer complaints. In industrial poultry processing, the chiller is a key post-slaughter step but may serve as a source of microbial contamination. In this study the variation in microbial status of the air chiller surface was profiled together with freshly produced and end-of-shelf-life chicken legs and skinless breast fillets across 18 production batches over eleven weeks. Samples were taken early and late shifts on Mondays and Thursdays. The air chiller was cleaned weekly on Fridays. Products were stored under modified atmosphere (60% CO2/40% N2) for 21 days at 4˚C, and a subset underwent temperature abuse (8˚C) during the last four days of storage. Microbial community composition was determined using partial 16S rRNA amplicon sequencing. Higher bacterial loads were found on air chiller swabs and fresh products collected at late shift on Thursdays than Mondays (padj < 0.05). A similar trend was observed for products at the end of shelf-life. At the end of shelf-life, the microbiota in chicken legs was dominated by Carnobacterium, Yersiniaceae and Lactobacillales, whereas breast fillets were dominated by Lactobacillus, Lactobacillales and Carnobacterium. The air chiller microbiota was dominated by Acinetobacter, Psychrobacter and Pseudomonas. Across weeks and sampling times, microbial load and community composition covaried between the air chiller and products, indicating that temporal shifts in the air chiller environment influenced or reflected the product microbiota. These findings identify the air chiller as a critical control point for targeted monitoring and intervention to mitigate spoilage risk. Recommended measures include mid-week cleaning, condensation and aerosol management, and MAP-matched incubation of environmental swabs to reveal CO2-tolerant spoilage bacteria.

## Full-text entities

- **Diseases:** dry (MESH:D015352), TVC (MESH:D009845)
- **Chemicals:** O2 (MESH:D010100), agar (MESH:D000362), acetonitrile (MESH:C032159), N2 (MESH:D009584), MAP (-), trifluoroacetic acid (MESH:D014269), CO2 (MESH:D002245), Gas (MESH:D005708)
- **Species:** Stenotrophomonas rhizophila (species) [taxon 216778], Salmonella (genus) [taxon 590], Escherichia coli (E. coli, species) [taxon 562], Campylobacter (genus) [taxon 194], Janthinobacterium (genus) [taxon 29580], Pseudolactococcus piscium (s__Lactococcus_A piscium, species) [taxon 1364], Brochothrix thermosphacta (species) [taxon 2756], Acinetobacter (genus) [taxon 469], Listeria (genus) [taxon 1637], Lactobacillus (genus) [taxon 1578], Carnobacterium maltaromaticum (species) [taxon 2751], Psychrobacter (genus) [taxon 497], Brochothrix (genus) [taxon 2755], Morganella psychrotolerans (species) [taxon 368603], Enterococcus (genus) [taxon 1350], Latilactobacillus curvatus (species) [taxon 28038], Meleagris gallopavo (common turkey, species) [taxon 9103], Leuconostoc (genus) [taxon 1243], Ewingella americana (species) [taxon 41202], Arthrobacter (genus) [taxon 1663], Homo sapiens (human, species) [taxon 9606], Carnobacterium sp. (species) [taxon 48221], Leptospira sp. AB (species) [taxon 103236], Pseudolactococcus raffinolactis (s__Lactococcus_A raffinolactis, species) [taxon 1366], Lactobacillales (order) [taxon 186826], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Carnobacterium (genus) [taxon 2747], Yersiniaceae (family) [taxon 1903411], Photobacterium (genus) [taxon 657], Carnobacterium divergens (species) [taxon 2748], Pseudomonas (RNA similarity group I, genus) [taxon 286], Latilactobacillus sakei (species) [taxon 1599], Myceliophthora sp. AP (species) [taxon 1176335], Enterobacteriaceae (enterobacteria, family) [taxon 543], Gallus gallus (bantam, species) [taxon 9031], Vagococcus (genus) [taxon 2737]

## Figures

12 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12974829/full.md

---
Source: https://tomesphere.com/paper/PMC12974829