# Identification of CD164 as an essential entry receptor for divergent adeno-associated viruses

**Authors:** Xiujuan Zhang, Donovan Richart, Shane McFarlin, Fang Cheng, Soo Yeun Park, Anwen Zhang-Chen, Richenda McFarlane, Chuan Xiao, Ziying Yan, Jianming Qiu

PMC · DOI: 10.1073/pnas.2525865123 · 2026-03-05

## TL;DR

This study identifies CD164 as a key receptor for Clade G adeno-associated viruses, revealing a new mechanism for gene therapy vector entry into cells.

## Contribution

The discovery of CD164 as an essential entry receptor for Clade G AAVs introduces a novel AAVR-independent pathway for viral transduction.

## Key findings

- CD164 is essential for the entry and transduction of Clade G AAVs.
- AAV4 capsids bind to CD164 with high affinity and colocalize during cell entry.
- CD164 knockout mice show nearly complete loss of transgene expression from Clade G AAVs.

## Abstract

rAAVs are widely used vectors for human gene therapy, yet the mechanisms governing their entry into host cells remain incompletely understood. While multiple AAV serotypes depend on the broadly expressed AAV receptor (AAVR) for cellular entry, AAV4-related Clade G AAVs transduce cells via an AAVR-independent mechanism. In this study, we identify that CD164, a transmembrane sialomucin located on the cell surface and in endosomal compartments, is essential to the entry and transduction of Clade G AAVs. CD164 directly binds to AAV capsids in vitro and colocalizes with the capsids during cell entry and endosomal trafficking. These findings expand our understanding of AAV–host interaction and reveal a distinct AAVR-independent entry mechanism with implications for vector design and gene therapy.

Recombinant adeno-associated viruses (rAAVs) are widely used for in vivo gene delivery. While KIAA0319L, known as AAV receptor (AAVR), is essential for the transduction of multiserotype AAVs, it is dispensable for AAV4-related (Clade G) AAVs. We conducted a genome-wide CRISPR/Cas9 screen and identified CD164, a type I transmembrane sialomucin, as an essential entry receptor for Clade G AAVs. Ablation of CD164 expression substantially impaired both entry and transduction of Clade G AAVs. CD164-targeting antibodies and soluble CD164 ectodomain effectively blocked transduction. AAV4 capsids colocalized with CD164 at the plasma membrane and in endosomal compartments. In vitro, CD164 interacted with AAV4 or AAVrh32.33 capsids at high affinity. Importantly, systemic administration of rAAV4 or rAAVrh32.33 in CD164 knockout (KO) mice resulted in nearly complete loss of transgene expression. These findings establish CD164 as an essential entry receptor for Clade G AAV vectors and uncover a distinct AAVR-independent mechanism of AAV tropism.

## Linked entities

- **Genes:** KIAA0319L (KIAA0319 like) [NCBI Gene 79932], CD164 (CD164 molecule) [NCBI Gene 8763]
- **Proteins:** KIAA0319L (KIAA0319 like), CD164 (CD164 molecule)

## Full-text entities

- **Genes:** ST3GAL1 (ST3 beta-galactoside alpha-2,3-sialyltransferase 1) [NCBI Gene 6482] {aka Gal-NAc6S, SIAT4A, SIATFL, ST3GalA, ST3GalA.1, ST3GalIA}, RAB5A (RAB5A, member RAS oncogene family) [NCBI Gene 5868] {aka RAB5}, GPR108 (G protein-coupled receptor 108) [NCBI Gene 56927] {aka LUSTR2}, LY96 (lymphocyte antigen 96) [NCBI Gene 23643] {aka ESOP-1, MD-2, MD2, ly-96}, CPD (carboxypeptidase D) [NCBI Gene 1362] {aka GP180}, ADRA2B (adrenoceptor alpha 2B) [NCBI Gene 151] {aka ADRA2L1, ADRA2RL1, ADRARL1, ALPHA2BAR, FAME2, alpha-2BAR}, GET3 (guided entry of tail-anchored proteins factor 3, ATPase) [NCBI Gene 439] {aka ARSA-I, ARSA1, ASNA-I, ASNA1, CMD2H, TRC40}, CD164 (CD164 molecule) [NCBI Gene 8763] {aka DFNA66, MGC-24, MGC-24v, MUC-24, endolyn}, Cd164 (CD164 antigen) [NCBI Gene 53599] {aka A115, A24, MGC-24, MSSP}, mucin [NCBI Gene 100508689], CD34 (CD34 molecule) [NCBI Gene 947], MRE11 (MRE11 double strand break repair nuclease) [NCBI Gene 4361] {aka ATLD, HNGS1, MRE11A, MRE11B}, RPGR (retinitis pigmentosa GTPase regulator) [NCBI Gene 6103] {aka COD1, CORDX1, CRD, PCDX, RP15, RP3}, POTEF (POTE ankyrin domain family member F) [NCBI Gene 728378] {aka A26C1B, POTE2alpha, POTEACTIN}, KIAA0319L (KIAA0319 like) [NCBI Gene 79932] {aka AAVR, AAVRL}, TGOLN2 (trans-golgi network protein 2) [NCBI Gene 10618] {aka TGN38, TGN46, TGN48, TGN51, TTGN2, hTGN46}, SDC2 (syndecan 2) [NCBI Gene 6383] {aka CD362, HSPG, HSPG1, SYND2}, RAB7B (RAB7B, member RAS oncogene family) [NCBI Gene 338382] {aka RAB7}, CAMLG (calcium modulating ligand) [NCBI Gene 819] {aka CAML, CDG2Z, GET2}, IGKV2-24 (immunoglobulin kappa variable 2-24) [NCBI Gene 28923] {aka A23, IGKV224}, CD44 (CD44 molecule (IN blood group)) [NCBI Gene 960] {aka CDW44, CSPG8, ECM-III, ECMR-III, H-CAM, HCELL}, MAFD1 (major affective disorder 1) [NCBI Gene 4095] {aka BPAD, MD1}, TM9SF2 (transmembrane 9 superfamily member 2) [NCBI Gene 9375] {aka Lnc-PCIR, P76}
- **Diseases:** IVIS (MESH:C564543), Leber's congenital amaurosis (MESH:D057130), inherited and acquired disorders (MESH:D030342), cystic fibrosis (MESH:D003550), cervical cancer (MESH:D002583)
- **Chemicals:** DAPI (MESH:C007293), Dox (MESH:D004317), Alexa Fluor 647 (MESH:C569686), AAVrh32.33 (-), D-luciferin (MESH:C532924), PNAS (MESH:D020135), SIA (MESH:D019158), glycan (MESH:D011134), N (MESH:D009584), His (MESH:D006639), blasticidin (MESH:C004500), sugars (MESH:D000073893), O (MESH:D010100)
- **Species:** Ascochyta sp. AV8 (species) [taxon 372030], Homo sapiens (human, species) [taxon 9606], Acinetobacter calcoaceticus (species) [taxon 471], adeno-associated virus 2 (no rank) [taxon 10804], Adeno-associated virus - 4 (no rank) [taxon 57579], LCMV [taxon 11623], Mus musculus (house mouse, species) [taxon 10090]
- **Mutations:** T2A, N104Q
- **Cell lines:** HeLa — Homo sapiens (Human), Human papillomavirus-related cervical squamous cell carcinoma, Cancer cell line (CVCL_T292), NIH3T3 — Mus musculus (Mouse), Spontaneously immortalized cell line (CVCL_0594), Huh-7 — Homo sapiens (Human), Adult hepatocellular carcinoma, Cancer cell line (CVCL_0336), 293 — Homo sapiens (Human), Transformed cell line (CVCL_0045), HSAE — Homo sapiens (Human), Telomerase immortalized cell line (CVCL_YB44), CuFi-8 — Homo sapiens (Human), Cystic fibrosis, Transformed cell line (CVCL_C0GK), COS7 — Chlorocebus aethiops (Green monkey), Transformed cell line (CVCL_0224), HEK293CD164 — Homo sapiens (Human), Transformed cell line (CVCL_B2TR), mCD164 — Homo sapiens (Human), I-cell disease, Finite cell line (CVCL_CX26), CCL-2 — Mus musculus (Mouse), Undefined cell line type (CVCL_M023), AAV4 — Homo sapiens (Human), Transformed cell line (CVCL_9804), CVCL_0336 — Homo sapiens (Human), Transformed cell line (CVCL_8Z29), /6Gpt — Homo sapiens (Human), Transformed cell line (CVCL_2280), HAE — Homo sapiens (Human), Chronic myelogenous leukemia, BCR-ABL1 positive, Cancer cell line (CVCL_SV31), 293-F — Homo sapiens (Human), Transformed cell line (CVCL_6642)

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12974471/full.md

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Source: https://tomesphere.com/paper/PMC12974471