# Mitotic BLM functions are required to maintain genomic stability

**Authors:** Tamara Eleanore Hamann, Angela Wieland, Farbod Mohseni, Kruno Vukušić, Andrea Tirincsi, Rene Wardenaar, Marialucrezia Losito, Iris Harmsen, Ipek Ilgin Gönenc, Bernd Wollnik, Floris Foijer, Iva M Tolić, Zuzana Storchová, Markus Räschle

PMC · DOI: 10.1093/nar/gkag199 · 2026-03-10

## TL;DR

The BLM protein plays a crucial role in resolving DNA bridges during cell division, which is essential for maintaining genomic stability.

## Contribution

A novel cell model system was developed to track BLM and UFB dynamics during mitosis using fluorescent tagging and auxin-inducible degradation.

## Key findings

- BLM localizes to UFBs and CENP-B-positive foci during anaphase, but not in interphase.
- Acute BLM depletion during mitosis leads to unresolved UFBs, micronuclei, and genomic abnormalities.
- BLM is essential for resolving ultrafine DNA bridges and preserving genomic stability during cell division.

## Abstract

The BLM helicase is a critical genome maintenance protein involved in diverse cellular processes including DNA replication, repair, transcription, and chromosome segregation. During mitosis, it cooperates with the PICH helicase and topoisomerases to resolve ultrafine DNA bridges (UFBs)—nonchromatinized DNA structures that link sister chromatids—through a mechanism that is not yet fully understood. Here, we tagged endogenous BLM and PICH with fluorescent proteins and BLM with an auxin-inducible degron to generate a cell model system that enables temporal tracking of UFB dynamics in the presence or absence of BLM. Time-resolved lattice light sheet microscopy established the dynamic localization patterns of BLM and PICH throughout the cell cycle. While BLM cycles between PML bodies and DNA repair foci in interphase, these structures disappear at the mitotic entry, and BLM then re-associates with chromatin during anaphase to UFBs as well as to CENP-B-positive mitotic foci. Acute BLM depletion during mitosis increased the fraction of unresolved UFBs, micronuclei containing acentric fragments, binucleation, and resulted in subtle genomic abnormalities detected by single-cell whole genome sequencing. These findings highlight a mitosis-specific role for BLM in UFB resolution and underscore its function in preserving genomic stability.

Graphical Abstract

## Linked entities

- **Genes:** BLM (BLM RecQ like helicase) [NCBI Gene 641], ERCC6L (ERCC excision repair 6 like, spindle assembly checkpoint helicase) [NCBI Gene 54821], CENPB (centromere protein B) [NCBI Gene 1059]
- **Proteins:** BLM (BLM RecQ like helicase), ERCC6L (ERCC excision repair 6 like, spindle assembly checkpoint helicase), CENPB (centromere protein B)

## Full-text entities

- **Genes:** PCNA (proliferating cell nuclear antigen) [NCBI Gene 5111] {aka ATLD2}, ERCC6L (ERCC excision repair 6 like, spindle assembly checkpoint helicase) [NCBI Gene 54821] {aka PICH, RAD26L}, HFM1 (helicase for meiosis 1) [NCBI Gene 164045] {aka MER3, POF9, SEC63D1, Si-11, Si-11-6, helicase}, BLNK (B cell linker) [NCBI Gene 29760] {aka AGM4, BASH, BLNK-S, LY57, SLP-65, SLP65}, TP53 (tumor protein p53) [NCBI Gene 7157] {aka BCC7, BMFS5, LFS1, P53, TRP53}, CDK1 (cyclin dependent kinase 1) [NCBI Gene 983] {aka CDC2, CDC28A, P34CDC2}, TOP3A (DNA topoisomerase III alpha) [NCBI Gene 7156] {aka MGRISCE2, PEOB5, TOP3, ZGRF7}, TOP2A (DNA topoisomerase II alpha) [NCBI Gene 7153] {aka TOP2, TOP2alpha, TOPIIA, TP2A}, BLM (BLM RecQ like helicase) [NCBI Gene 641] {aka BS, MGRISCE1, RECQ2, RECQL2, RECQL3}, TTK (TTK protein kinase) [NCBI Gene 7272] {aka CT96, ESK, MPH1, MPS1, MPS1L1, PYT}, RMI1 (RecQ mediated genome instability 1) [NCBI Gene 80010] {aka BLAP75, C9orf76, FAAP75}, PLK1 (polo like kinase 1) [NCBI Gene 5347] {aka PLK, STPK13}, AICDA (activation induced cytidine deaminase) [NCBI Gene 57379] {aka AID, ARP2, CDA2, HEL-S-284, HIGM2}, FANCD2 (FA complementation group D2) [NCBI Gene 2177] {aka FA-D2, FA4, FACD, FAD, FAD2, FANCD}, RIF1 (replication timing regulatory factor 1) [NCBI Gene 55183], TP53BP1 (tumor protein p53 binding protein 1) [NCBI Gene 7158] {aka 53BP1, TDRD30, p202, p53BP1}, PML (PML nuclear body scaffold) [NCBI Gene 5371] {aka MYL, PP8675, RNF71, TRIM19}, RMI2 (RecQ mediated genome instability 2) [NCBI Gene 116028] {aka BLAP18, C16orf75}, RAD51 (RAD51 recombinase) [NCBI Gene 5888] {aka BRCC5, FANCR, HRAD51, HsRad51, HsT16930, MRMV2}, ACTN1 (actinin alpha 1) [NCBI Gene 87] {aka BDPLT15}, RPA1 (replication protein A1) [NCBI Gene 6117] {aka HSSB, MST075, PFBMFT6, REPA1, RF-A, RP-A}, CENPB (centromere protein B) [NCBI Gene 1059], H2AX (H2A.X variant histone) [NCBI Gene 3014] {aka H2A.X, H2A/X, H2AFX}
- **Diseases:** developmental defects (MESH:D000094602), tumorigenesis (MESH:D063646), Chromosome Instability (MESH:D043171), genetic disorder (MESH:D030342), MN (MESH:D048629), Bloom syndrome (MESH:D001816), aneuploidy (MESH:D000782), colon cancer (MESH:D015179), immunodeficiency (MESH:D007153), Cancer (MESH:D009369), genomic abnormalities (MESH:D042822)
- **Chemicals:** CO2 (MESH:D002245), NaN3 (MESH:D019810), S + M (MESH:D012493), hygromycin B (MESH:D006921), Hoechst 33258 (MESH:D006690), Giemsa (MESH:D001399), H2O (MESH:D014867), Ponceau S (MESH:C032756), TBS (MESH:D013725), PFA (MESH:C003043), acetic acid (MESH:D019342), SDS (MESH:D012967), Verapamil (MESH:D014700), ascorbic acid (MESH:D001205), 5-Ethynyl-2'-deoxyuridine (MESH:C031086), IAA (MESH:C030737), KCl (MESH:D011189), TBS-T (MESH:C027647), Tween 20 (MESH:D011136), Auxin (MESH:D007210), neomycin (MESH:D009355), colcemid (MESH:D003703), ethanol (MESH:D000431), glucose (MESH:D005947), GlutaMAX (MESH:C054122), 4',6-diamidino-2-phenylindole (MESH:C007293), DMSO (MESH:D004121), crystal violet (MESH:D005840), methanol (MESH:D000432), S (MESH:D013455), sodium deoxycholate (MESH:D003840), NaCl (MESH:D012965), PI (MESH:D011419), cisplatin (MESH:D002945), 1x (-), doxycycline (MESH:D004318), CuSO4 (MESH:D019327), glycerol (MESH:D005990), puromycin (MESH:D011691), penicillin (MESH:D010406), sodium citrate (MESH:D000077559), Dox (MESH:D004317), EDTA (MESH:D004492), bromphenol blue (MESH:D001978), APH (MESH:D016590), bromodeoxyuridine (MESH:D001973), NP-40 (MESH:C010615), streptomycin (MESH:D013307), oil (MESH:D009821), palbociclib (MESH:C500026), hygromycin (MESH:C026273), thymidine (MESH:D013936), Triton-X-100 (MESH:D017830)
- **Species:** Mycoplasma (genus) [taxon 2093], Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]
- **Mutations:** T24, T24 S, T24 M
- **Cell lines:** HCT116 — Homo sapiens (Human), Colon carcinoma, Cancer cell line (CVCL_0291), Tet — Homo sapiens (Human), Neuroblastoma, Cancer cell line (CVCL_HF70), OsTIR1 — Homo sapiens (Human), Colon carcinoma, Cancer cell line (CVCL_RJ11)

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12972901/full.md

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Source: https://tomesphere.com/paper/PMC12972901