# Inactivation of Avian Influenza Virus in Raw Milk Kefir

**Authors:** Anna C. S. Porto-Fett, Sonsiray Alvarez-Narvaez, Poonam G. Vinayamohan, Telvin Harrell, Abdulkarim Shwani, David L. Suarez, John B. Luchansky

PMC · DOI: 10.1007/s12560-026-09686-2 · Food and Environmental Virology · 2026-03-09

## TL;DR

Fermenting raw milk into kefir significantly reduces avian influenza virus levels, lowering the risk of consuming contaminated milk.

## Contribution

This study demonstrates that kefir fermentation effectively inactivates avian influenza virus in raw milk.

## Key findings

- Fermentation reduced H5N1 and H5N9 virus titers by 4.1 and 3.1 log10 EID50/mL, respectively.
- pH reduction during fermentation to ≤5.3 significantly decreased viral levels.
- Both spontaneous and starter-culture fermentation achieved similar virus inactivation.

## Abstract

Both highly pathogenic avian influenza virus (HPAIV) and its viral RNA have been detected in raw milk during the ongoing outbreak in dairy cows. While pasteurization effectively inactivates the virus in milk, comparatively little has been published on AIV inactivation in fermented dairy products made from raw milk. We evaluated the viability of two isolates of low pathogenic avian influenza virus (LPAIV) during fermentation of kefir to assess the potential for viral persistence. Raw (unpasteurized) milk (ca. 3.0% fat) was inoculated with ca. 7.5 log10 CFU per mL of active commercial kefir starter culture. Next, raw milk (125 mL) was inoculated with 1.0 mL of either strain A/rgGyrfalconHAxPR8/2014 H5N1 or A/turkey/Wisconsin/1968 H5N9 to achieve an average initial level of ca. 5.0 log10 50% egg infectious doses (EID50) per mL. The inoculated raw milk (ca. pH 6.55 ± 0.05) was fermented at 25 °C for ca. 36 h to an average endpoint pH of pH 4.44 ± 0.05. Results confirmed that fermentation of raw milk to produce kefir delivered an appreciable reduction of both LPAIV strains, that being a ca. 4.1 or 3.1 log10 EID50 per mL decrease of strains H5N1 or H5N9, respectively, from their initial levels in raw milk. In the absence of a starter culture, due to fermentation by the indigenous flora the pH of the raw milk after incubation at 25 °C for ca. 36 h also significantly decreased on average to ca. pH 5.3:, and levels of strains H5N1 and H5N9 were reduced by 4.1 and 3.5 log10 EID50 per mL, respectively. Our findings established that fermentation of raw milk (with or without added kefir starter culture) to ≤ pH 5.3 over ca. 36 h at 25 °C appreciably decreases titers (≥ 3.1 log10 EID50 per mL) of AIV strains H5N1 and H5N9 and, therefore, lowers risk associated with its consumption.

## Linked entities

- **Diseases:** avian influenza (MONDO:0018695)

## Full-text entities

- **Diseases:** illness (MESH:D002908), bacterial (MESH:D001424), zoonosis (MESH:D015047), AIV infection (MESH:D007239), fatalities (MESH:C565541), deaths (MESH:D003643), viral infections (MESH:D014777), bird flu (MESH:D001715), Milk (MESH:D016269)
- **Chemicals:** sulfamerazine (MESH:D013416), lincomycin (MESH:D008034), sulfaquinoxaline (MESH:D013428), glucose (MESH:D005947), chlortetracycline (MESH:D002751), fructose (MESH:D005632), marbofloxacin (MESH:C080260), sulfamonomethoxine (MESH:D013422), ampicillin (MESH:D000667), citric (MESH:D019343), oxacillin (MESH:D010068), sulfamethoxypyridazine (MESH:D013421), sucrose (MESH:D013395), sulfapyridine (MESH:D013427), dicloxacillin (MESH:D004009), sulfathiazole (MESH:D000077589), difloxacin (MESH:C047225), carbohydrate (MESH:D002241), EDTA 2X (-), maltose (MESH:D008320), sulfamethoxazole (MESH:D013420), penicillin (MESH:D010406), tetracycline (MESH:D013752), josamycin (MESH:D015570), isopropanol (MESH:D019840), Acetic acid (MESH:D019342), sulfadimethoxine (MESH:D013412), amoxicillin (MESH:D000658), sulfadoxine (MESH:D013413), ethanol (MESH:D000431), spiramycin (MESH:D015572), erythromycin (MESH:D004917), oxytetracycline (MESH:D010118), H2O (MESH:D014867), cloxacillin (MESH:D003023), danofloxacin (MESH:C068581), tylosin (MESH:D015645), sulfamethizole (MESH:D013419), sulfisoxazole (MESH:D013444), nafcillin (MESH:D009254), norfloxacin (MESH:D009643), lactose (MESH:D007785), lactic acid (MESH:D019344), sulfachlorpyridazine (MESH:D013410), sarafloxacin (MESH:C047224), sulfamethazine (MESH:D013418), ciprofloxacin (MESH:D002939), streptomycin (MESH:D013307), enrofloxacin (MESH:D000077422), doxycycline (MESH:D004318), flumequine (MESH:C012976), NaCl (MESH:D012965), sodium sulfite (MESH:C025026), sugars (MESH:D000073893), maltodextrin (MESH:C008315), phosphate (MESH:D010710), sulfadiazine (MESH:D013411)
- **Species:** Streptococcus thermophilus (species) [taxon 1308], H5N1 subtype (serotype) [taxon 102793], Gallus gallus (bantam, species) [taxon 9031], H6N2 subtype (serotype) [taxon 119213], unidentified influenza virus (species) [taxon 11309], Coxiella burnetii (species) [taxon 777], Bos taurus (bovine, species) [taxon 9913], Acetobacter subgen. Acetobacter (subgenus) [taxon 151157], Leptospira sp. AB (species) [taxon 103236], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Mycobacterium tuberculosis (species) [taxon 1773], Felis catus (cat, species) [taxon 9685], Homo sapiens (human, species) [taxon 9606], H5N9 subtype (serotype) [taxon 140020], Listeria monocytogenes (species) [taxon 1639], Meleagris gallopavo (common turkey, species) [taxon 9103], Lactococcus lactis (species) [taxon 1358], Lactobacillus acidophilus (species) [taxon 1579], Lactobacillus delbrueckii subsp. bulgaricus (subspecies) [taxon 1585], Leuconostoc mesenteroides (species) [taxon 1245], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Campylobacter (genus) [taxon 194], Escherichia coli (E. coli, species) [taxon 562], Salmonella (genus) [taxon 590], Procyon lotor (northern raccoon, species) [taxon 9654]

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## References

8 references — full list in the complete paper: https://tomesphere.com/paper/PMC12971784/full.md

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Source: https://tomesphere.com/paper/PMC12971784