# Patient-derived organoids predict chemotherapy response of locally advanced gastric cancer

**Authors:** Miao Huang, Jiahui Chu, Wenbin Yu, Liliang Dou, Qiushi Wang, Fan Jiang, Meng Wei, Xiaohan Cui, Wen Zhao, Jianyuan Zhou, Song Li, Lian Liu

PMC · DOI: 10.1371/journal.pone.0339416 · PLOS One · 2026-03-09

## TL;DR

Patient-derived organoids can predict how gastric cancer patients will respond to chemotherapy, helping personalize treatment.

## Contribution

The study demonstrates that organoids from gastric cancer patients can accurately predict drug responses and improve treatment outcomes.

## Key findings

- PDOs accurately recapitulate tumor histopathology and genetic features.
- SRCC-derived PDOs are sensitive to epirubicin and paclitaxel but resistant to 5-FU and oxaliplatin.
- Ex vivo drug testing in PDOs predicted clinical responses with high accuracy and improved disease-free survival.

## Abstract

The efficacy of standard adjuvant chemotherapy for locally advanced gastric cancer (GC) remains suboptimal, particularly in patients with signet-ring cell carcinoma (SRCC). Urgent demand exists for reliable preclinical models to predict therapeutic responses, and in vitro drug sensitivity testing using patient-derived organoids (PDOs) has emerged as a promising platform. In this study, PDOs were established from patients with locally advanced GC and analyzed via next-generation sequencing (NGS) and pharmacotyping. Seventeen GC PDOs were successfully generated, achieving a success rate of 63%. These PDOs closely recapitulated the histopathological and genetic features of their parental tumors. Drug sensitivity tests revealed subtype-specific response patterns: PDOs derived from SRCC were sensitive to epirubicin and paclitaxel but resistant to 5-fluorouracil (5-FU) and oxaliplatin. In contrast, non-SRCC PDOs demonstrated robust sensitivity to paclitaxel, epirubicin, and oxaliplatin. Among all tested drugs, paclitaxel showed the highest tumor-inhibitory efficacy in both subtypes. Furthermore, non-SRCC PDOs were significantly more sensitive to 5-FU and oxaliplatin than SRCC PDOs. Ex vivo pharmacotyping of PDOs accurately predicted clinical therapeutic responses in GC patients, with a sensitivity of 85.7%, specificity of 100%, and accuracy of 90.9%. Notably, patients whose PDOs were drug-sensitive in vitro had significantly longer disease-free survival than those whose PDOs were drug-resistant (P = 0.044). These findings highlight the potential of GC PDOs as reliable preclinical models that faithfully recapitulate tumor biology and therapeutic responses, thereby providing a valuable tool for predicting individualized treatment outcomes and advancing precision oncology for GC.

## Linked entities

- **Chemicals:** epirubicin (PubChem CID 41867), paclitaxel (PubChem CID 36314), 5-fluorouracil (PubChem CID 3385), oxaliplatin (PubChem CID 9887053)
- **Diseases:** gastric cancer (MONDO:0001056), signet-ring cell carcinoma (MONDO:0005092)

## Full-text entities

- **Genes:** TP53 (tumor protein p53) [NCBI Gene 7157] {aka BCC7, BMFS5, LFS1, P53, TRP53}, ARID1A (AT-rich interaction domain 1A) [NCBI Gene 8289] {aka B120, BAF250, BAF250a, BM029, C1orf4, CSS2}, mucin [NCBI Gene 100508689], MAP1A (microtubule associated protein 1A) [NCBI Gene 4130] {aka MAP1L, MTAP1A}, KMT2C (lysine methyltransferase 2C) [NCBI Gene 58508] {aka HALR, KLEFS2, MLL3}, CDX2 (caudal type homeobox 2) [NCBI Gene 1045] {aka CDX-3, CDX2/AS, CDX3}, CMYA5 (cardiomyopathy associated 5) [NCBI Gene 202333] {aka C5orf10, SPRYD2, TRIM76}, GSDMB (gasdermin B) [NCBI Gene 55876] {aka GSDMB-1, GSDML, PP4052, PRO2521}, KRT7 (keratin 7) [NCBI Gene 3855] {aka CK7, K2C7, K7, SCL}, KRT20 (keratin 20) [NCBI Gene 54474] {aka CD20, CK-20, CK20, K20, KRT21}, FAT4 (FAT atypical cadherin 4) [NCBI Gene 79633] {aka CDHF14, CDHR11, FAT-J, FATJ, HKLLS2, NBLA00548}, SVEP1 (sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1) [NCBI Gene 79987] {aka C9orf13, CCP22, POLYDOM, SEL-OB, SELOB}, BRCA2 (BRCA2 DNA repair associated) [NCBI Gene 675] {aka BRCC2, BROVCA2, FACD, FAD, FAD1, FANCD}, RAD23A (RAD23 nucleotide excision repair protein A) [NCBI Gene 5886] {aka HHR23A, HR23A}, C10orf71 (chromosome 10 open reading frame 71) [NCBI Gene 118461] {aka CEFIP, CMD1QQ}, MUC16 (mucin 16, cell surface associated) [NCBI Gene 94025] {aka CA125}
- **Diseases:** GC (MESH:D013274), lung cancer (MESH:D008175), Tumor (MESH:D009369), disease (MESH:D004194), SRCC (MESH:D018279), stage III (MESH:D062706), ovarian metastasis (MESH:D010049), lymph node or duodenal metastasis (MESH:D008207), IV (MESH:D006011), PD (MESH:D018450), PDOs (MESH:C536408), Liver metastases (MESH:D009362), death (MESH:D003643), colorectal cancer (MESH:D015179)
- **Chemicals:** tegafur (MESH:D005641), Oxaliplatin (MESH:D000077150), ethanol (MESH:D000431), tislelizumab (MESH:C000707970), 5-FU (MESH:D005472), xylene (MESH:D014992), Paclitaxel (MESH:D017239), SN-38 (MESH:D000077146), paraffin (MESH:D010232), PBS (MESH:D007854), gimeracil (MESH:C104201), apatinib (MESH:C553458), taxane (MESH:C080625), docetaxel (MESH:D000077143), DMSO (MESH:D004121), CO2 (MESH:D002245), sintilimab (MESH:C000632826), paraformaldehyde (MESH:C003043), camrelizumab (MESH:C000631724), capecitabine (MESH:D000069287), oteracil (MESH:D010094), DMEM/F12 (-), Epirubicin (MESH:D015251), Y-27632 (MESH:C108830), H&amp;E (MESH:D006371), Hematoxylin (MESH:D006416)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** A490 — Mus musculus (Mouse), Hybridoma (CVCL_B375)

## Full text

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## Figures

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## References

36 references — full list in the complete paper: https://tomesphere.com/paper/PMC12970873/full.md

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Source: https://tomesphere.com/paper/PMC12970873