# Programming Next‐Generation Synthetic Biosensors by Genetic Circuit Design

**Authors:** Yuanli Gao, Cheng Huang, Jiaxuan Deng, Lei Wang, Baojun Wang

PMC · DOI: 10.1002/advs.202524172 · Advanced Science · 2026-02-08

## TL;DR

This review discusses how genetic circuits can be used to create synthetic biosensors for various applications, while addressing challenges in their real-world use.

## Contribution

The paper provides a comprehensive analysis of design principles and strategies for improving the performance of synthetic biosensors.

## Key findings

- Recent advancements in genetic circuit-enabled biosensors are summarized, focusing on sensory mechanisms and applications.
- Methods for tuning dose-response characteristics like detection limit and dynamic range are thoroughly examined.
- Functional extensions through signal-processing and output modules are discussed for broader application potential.

## Abstract

Synthetic biology employs engineering principles to construct genetic circuits with customized functionality, empowering unprecedented control over biological systems. By harnessing this capability to precisely manipulate biological systems, synthetic biosensors are being developed as promising biosensing platforms for on‐site, sustainable, affordable, and easy‐to‐use detection across diverse scenarios, such as environmental monitoring, disease diagnosis, food safety control, and bioproduction optimization. However, the field deployment and real‐world application of synthetic biosensors face considerable challenges in biosensing sensitivity, specificity, speed, stability, and biosafety. This review summarizes recent advancements of genetic circuit‐enabled synthetic biosensors, focusing on their sensory mechanisms, designs, and applications. Moreover, the design principles, enabling tools, and engineering strategies for creating a high‐performing synthetic biosensor are analyzed. In particular, methods for tuning various characteristics of the dose‐response curve, including detection limit, detection threshold, operating range, dynamic range, and leakiness, are thoroughly examined. Finally, this review discusses the functional extension of biosensors by customizing signal‐processing and output modules, and outlines future directions to expedite the transition of synthetic biosensors from laboratory settings to field applications. Genetic circuit‐enabled synthetic biosensors, in collaboration with materials science, electronic engineering, and artificial intelligence, will tremendously expand the application space of synthetic biology.

Synthetic biology enables genetic circuit‐based biosensing to detect diverse targets, process signals, and transduce them into readable outputs or intracellular regulatory activities. However, field deployment and real‐world application of such synthetic biosensors face considerable challenges in sensitivity, specificity, speed, stability, and biosafety. This review summarizes the sensory mechanisms, design principles, functional extensions, and future directions of genetic circuit‐enabled synthetic biosensors.

## Full-text entities

- **Genes:** NEFL (neurofilament light chain) [NCBI Gene 4747] {aka CMT1F, CMT2E, CMTDIG, NF-L, NF68, NFL}, ACOD1 (aconitate decarboxylase 1) [NCBI Gene 730249] {aka CAD, IRG1}, ADAR (adenosine deaminase RNA specific) [NCBI Gene 103] {aka ADAR1, AGS6, DRADA, DSH, DSRAD, G1P1}, HCFC1 (host cell factor C1) [NCBI Gene 3054] {aka CFF, HCF, HCF-1, HCF1, HFC1, MAHCX}, PPP1R8 (protein phosphatase 1 regulatory subunit 8) [NCBI Gene 5511] {aka ARD-1, ARD1, NIPP-1, NIPP1, PRO2047}, TCOF1 (treacle ribosome biogenesis factor 1) [NCBI Gene 6949] {aka MFD1, TCS, TCS1, treacle}, GDNF (glial cell derived neurotrophic factor) [NCBI Gene 2668] {aka ATF, ATF1, ATF2, HFB1-GDNF, HSCR3}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, IDH1 (isocitrate dehydrogenase (NADP(+)) 1) [NCBI Gene 3417] {aka HEL-216, HEL-S-26, IDCD, IDH, IDP, IDPC}, BAR1 (aspartyl protease BAR1) [NCBI Gene 854797] {aka SST1}, TFPI (tissue factor pathway inhibitor) [NCBI Gene 7035] {aka EPI, LACI, TFI, TFPI1}, CXADRP1 (CXADR pseudogene 1) [NCBI Gene 653108] {aka CAR, CXADRP}, ESCO2 (establishment of sister chromatid cohesion N-acetyltransferase 2) [NCBI Gene 157570] {aka 2410004I17Rik, EFO2, EFO2p, JHS, RBS, hEFO2}, STK24 (serine/threonine kinase 24) [NCBI Gene 8428] {aka HEL-S-95, MST3, MST3B, STE20, STK3}, TTR (transthyretin) [NCBI Gene 7276] {aka AMYLD1, ATTR, CTS, CTS1, HEL111, HsT2651}, ADRA2B (adrenoceptor alpha 2B) [NCBI Gene 151] {aka ADRA2L1, ADRA2RL1, ADRARL1, ALPHA2BAR, FAME2, alpha-2BAR}, GPR166P (G protein-coupled receptor 166, pseudogene) [NCBI Gene 442206] {aka GPCR, PGR9}, GLB1 (galactosidase beta 1) [NCBI Gene 2720] {aka EBP, ELNR1, MPS4B}, LAMTOR5 (late endosomal/lysosomal adaptor, MAPK and MTOR activator 5) [NCBI Gene 10542] {aka HBXIP, XIP}, CDS1 (CDP-diacylglycerol synthase 1) [NCBI Gene 1040] {aka CDS 1}, LYZ (lysozyme) [NCBI Gene 4069] {aka AMYLD5, LYZF1, LZM}, F3 (coagulation factor III, tissue factor) [NCBI Gene 2152] {aka CD142, TF, TFA}, NR6A1 (nuclear receptor subfamily 6 group A member 1) [NCBI Gene 2649] {aka CT150, GCNF, GCNF1, NR61, RTR, hGCNF}
- **Diseases:** fungal contamination (MESH:D009181), typhoid (MESH:D014435), hypoxia (MESH:D000860), bacterial (MESH:D001424), inflammatory bowel disease (MESH:D015212), depression (MESH:D003866), gastric bleeding (MESH:D013274), cardiovascular disorders (MESH:D002318), infection (MESH:D007239), Alzheimer's disease (MESH:D000544), cancer (MESH:D009369), colitis (MESH:D003092), toxicity (MESH:D064420), health (OMIM:603663), schizophrenia (MESH:D012559), heavy metal contamination (MESH:D000075322), gut inflammation (MESH:D007249)
- **Chemicals:** violacein (MESH:C063155), dopamine (MESH:D004298), lead (MESH:D007854), lysine (MESH:D008239), arsenic (MESH:D001151), cadmium (MESH:D002104), L-Trp (MESH:D014364), alkaloids (MESH:D000470), copper (MESH:D003300), serotonin (MESH:D012701), glucose (MESH:D005947), heavy metal (MESH:D019216), sarcosine (MESH:D012521), cadaverine (MESH:D002103), ATP (MESH:D000255), water (MESH:D014867), aspirin (MESH:D001241), IPTG (MESH:D007544), Co2+ (MESH:D002245), 4-HT (MESH:C016601), uranium (MESH:D014501), iron (MESH:D007501), agarose (MESH:D012685), aTc (MESH:C016229), naringenin (MESH:C005273), fluoride (MESH:D005459), 5-HTP (MESH:D006916), fluorescein (MESH:D019793), glucaric acid (MESH:D005937), benzoic acid (MESH:D019817), D-lactic acid (MESH:D019344), aspartate (MESH:D001224), ASP2905 (MESH:C000626706), heme (MESH:D006418), choline (MESH:D002794), uric acid (MESH:D014527), cocaine (MESH:D003042), agar (MESH:D000362), phloretin (MESH:D010693), riboflavin (MESH:D012256), carbohydrates (MESH:D002241), rapamycin (MESH:D020123), carbon (MESH:D002244), Pyruvate (MESH:D019289), hydrogen peroxide (MESH:D006861), metal (MESH:D008670), hippuric acid (MESH:C030514), AvCystatin (-), Bile salt (MESH:D001647), gold (MESH:D006046), PCA (MESH:C037165), histamine (MESH:D006632), TMAO (MESH:C005855), sugar (MESH:D000073893), mercury (MESH:D008628), nitrate (MESH:D009566), phenazine (MESH:C000598831), Thiosulfate (MESH:D013885), tetracycline (MESH:D013752), caffeine (MESH:D002110)
- **Species:** Lactococcus lactis (species) [taxon 1358], Sus scrofa (pig, species) [taxon 9823], Chikungunya virus (no rank) [taxon 37124], Bacteroides thetaiotaomicron (species) [taxon 818], Shewanella (genus) [taxon 22], Salmonella enterica (species) [taxon 28901], Bacillus licheniformis (species) [taxon 1402], Severe acute respiratory syndrome coronavirus 2 (no rank) [taxon 2697049], Vibrio cholerae (species) [taxon 666], Hepatitis delta virus (no rank) [taxon 12475], Burkholderia glumae (species) [taxon 337], Mus musculus (house mouse, species) [taxon 10090], Caulobacter vibrioides (species) [taxon 155892], Homo sapiens (human, species) [taxon 9606], Proteus mirabilis (species) [taxon 584], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Zika virus (no rank) [taxon 64320], Bacillus subtilis (species) [taxon 1423], Corynebacterium glutamicum (species) [taxon 1718], Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702], Escherichia coli (E. coli, species) [taxon 562], Pseudomonas putida (species) [taxon 303]
- **Mutations:** L212P

## Full text

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## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12970293/full.md

## References

243 references — full list in the complete paper: https://tomesphere.com/paper/PMC12970293/full.md

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Source: https://tomesphere.com/paper/PMC12970293