# Roles of RNA-binding proteins in macrophage function regulation and immunotherapy

**Authors:** Jia Chen, Xiulin Jiang, Yixiao Yuan, Chunhong Li, Chongxin Li, Qiang Zhou, Qiang Wang, Weiwei Bai

PMC · DOI: 10.3389/fcell.2026.1771892 · Frontiers in Cell and Developmental Biology · 2026-02-23

## TL;DR

This paper reviews how RNA-binding proteins regulate macrophage functions and their potential in immunotherapy.

## Contribution

It systematically summarizes novel molecular mechanisms of RNA-binding proteins in macrophage regulation and their therapeutic implications.

## Key findings

- RNA-binding proteins modulate macrophage polarization and inflammation through post-transcriptional control.
- RBPs influence tumor microenvironment remodeling and immune suppression via RNA modifications and noncoding RNAs.

## Abstract

Macrophages are essential components of the innate immune system and exhibit remarkable functional plasticity, playing pivotal roles in inflammatory responses, maintenance of tissue homeostasis, and the initiation and progression of tumors as well as a wide range of other diseases. Accumulating evidence in recent years has demonstrated that, in addition to classical transcriptional regulation, post-transcriptional regulation is equally critical for macrophage fate determination and functional specialization. RNA-binding proteins (RBPs), as central regulators of post-transcriptional gene control, orchestrate a sophisticated and dynamic gene expression network by modulating RNA splicing, nucleocytoplasmic transport, stability and decay, translational efficiency, RNA epigenetic modifications, liquid–liquid phase separation, and chromatin-associated processes. Substantial experimental data indicate that RBPs are deeply involved in macrophage polarization, survival and programmed cell death, as well as metabolic reprogramming, thereby shaping the magnitude of inflammatory responses, immune suppressive states, and remodeling of the tumor microenvironment. In this review, we systematically summarize the molecular mechanisms by which RBPs regulate macrophage functions, with particular emphasis on their roles in inflammatory disorders, cancer, and metabolism-related diseases. We also highlight recent advances in the coordinated regulation of macrophage biology by RBPs in conjunction with RNA modifications, including m6A, m5C, and ac4C, as well as noncoding RNAs. Finally, we discuss the opportunities and challenges of targeting RBPs as emerging immunotherapeutic strategies, underscoring their potential in reprogramming the tumor immune microenvironment and enhancing the efficacy of immunotherapy, thereby providing a theoretical framework for the development of precise immune intervention approaches.

## Linked entities

- **Diseases:** cancer (MONDO:0004992)

## Full-text entities

- **Genes:** IL4 (interleukin 4) [NCBI Gene 3565] {aka BCGF-1, BCGF1, BSF-1, BSF1, IL-4}, OTUD5 (OTU deubiquitinase 5) [NCBI Gene 55593] {aka DUBA, MCAND}, STK17B (serine/threonine kinase 17b) [NCBI Gene 9262] {aka DRAK2}, SERPINE1 (serpin family E member 1) [NCBI Gene 5054] {aka PAI, PAI-1, PAI1, PLANH1}, FOXP1 (forkhead box P1) [NCBI Gene 27086] {aka 12CC4, HSPC215, MFH, QRF1, hFKH1B}, PIM2 (Pim-2 proto-oncogene, serine/threonine kinase) [NCBI Gene 11040], RBFOX2 (RNA binding fox-1 homolog 2) [NCBI Gene 23543] {aka FOX2, Fox-2, HNRBP2, HRNBP2, RBM9, RTA}, SRPK1 (SRSF protein kinase 1) [NCBI Gene 6732] {aka SFRSK1}, ALKBH5 (alkB homolog 5, RNA demethylase) [NCBI Gene 54890] {aka ABH5, OFOXD, OFOXD1}, HIF1A (hypoxia inducible factor 1 subunit alpha) [NCBI Gene 3091] {aka HIF-1-alpha, HIF-1A, HIF-1alpha, HIF1, HIF1-ALPHA, MOP1}, SIRPA (signal regulatory protein alpha) [NCBI Gene 140885] {aka BIT, CD172A, MFR, MYD-1, MYD1, P84}, IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}, CES2 (carboxylesterase 2) [NCBI Gene 8824] {aka CE-2, CES2A1, PCE-2, iCE}, FZD2 (frizzled class receptor 2) [NCBI Gene 2535] {aka Fz2, OMOD2, fz-2, fzE2, hFz2}, RBPJ (recombination signal binding protein for immunoglobulin kappa J region) [NCBI Gene 3516] {aka AOS3, CBF-1, CBF1, IGKJRB, IGKJRB1, KBF2}, ZNF683 (zinc finger protein 683) [NCBI Gene 257101] {aka Hobit}, CD274 (CD274 molecule) [NCBI Gene 29126] {aka ADMIO5, B7-H, B7H1, PD-L1, PDCD1L1, PDCD1LG1}, IGF2BP3 (insulin like growth factor 2 mRNA binding protein 3) [NCBI Gene 10643] {aka CT98, IMP-3, IMP3, KOC, KOC1, VICKZ3}, WTAP (WT1 associated protein) [NCBI Gene 9589] {aka Mum2}, PRDM9 (PR/SET domain 9) [NCBI Gene 56979] {aka KMT8B, MEISETZ, MSBP3, PFM6, ZNF899}, GPX4 (glutathione peroxidase 4) [NCBI Gene 2879] {aka GPx-4, GSHPx-4, MCSP, PHGPx, SMDS, snGPx}, FGF9 (fibroblast growth factor 9) [NCBI Gene 2254] {aka FGF-9, GAF, HBFG-9, HBGF-9, SYNS3}, KLF12 (KLF transcription factor 12) [NCBI Gene 11278] {aka AP-2rep, AP2REP, HSPC122}, CD47 (CD47 molecule) [NCBI Gene 961] {aka IAP, MER6, OA3}, TSC1 (TSC complex subunit 1) [NCBI Gene 7248] {aka LAM, TSC}, IGF2BP2 (insulin like growth factor 2 mRNA binding protein 2) [NCBI Gene 10644] {aka IMP-2, IMP2, VICKZ2}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}, PPARG (peroxisome proliferator activated receptor gamma) [NCBI Gene 5468] {aka CIMT1, FPLD3, GLM1, NR1C3, PPARG1, PPARG2}, SLC2A1 (solute carrier family 2 member 1) [NCBI Gene 6513] {aka CSE, DYT17, DYT18, DYT9, EIG12, GLUT}, B4GALT1 (beta-1,4-galactosyltransferase 1) [NCBI Gene 2683] {aka B4GAL-T1, CDG2D, CLDLFIB, GGTB2, GT1, GTB}, IL13 (interleukin 13) [NCBI Gene 3596] {aka IL-13, P600}, PDHA1 (pyruvate dehydrogenase E1 subunit alpha 1) [NCBI Gene 5160] {aka E1alpha, PDHA, PDHAD, PDHCE1A, PHE1A}, EGFR (epidermal growth factor receptor) [NCBI Gene 1956] {aka ERBB, ERBB1, ERRP, HER1, NISBD2, NNCIS}, ENO1 (enolase 1) [NCBI Gene 2023] {aka ENO1-IT1, ENO1L1, HEL-S-17, MPB1, NNE, PPH}, CSF1 (colony stimulating factor 1) [NCBI Gene 1435] {aka CSF-1, MCSF, PG-M-CSF}, SLC2A4 (solute carrier family 2 member 4) [NCBI Gene 6517] {aka GLUT4}, CGAS (cyclic GMP-AMP synthase) [NCBI Gene 115004] {aka C6orf150, D4, MB21D1, h-cGAS}, RBM25 (RNA binding motif protein 25) [NCBI Gene 58517] {aka NET52, RED120, RNPC7, S164, Snu71, fSAP94}, CTNNB1 (catenin beta 1) [NCBI Gene 1499] {aka CTNNB, EVR7, MRD19, NEDSDV, armadillo}, GBP2 (guanylate binding protein 2) [NCBI Gene 2634], ZFP36 (ZFP36 zinc finger CCCH-type) [NCBI Gene 7538] {aka G0S24, GOS24, NUP475, RNF162A, TIS11, TTP}, METTL3 (methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit) [NCBI Gene 56339] {aka IME4, M6A, MT-A70, Spo8, hMETTL3}, NFE2L2 (NFE2 like bZIP transcription factor 2) [NCBI Gene 4780] {aka IMDDHH, NRF2, Nrf-2}, SRSF10 (serine and arginine rich splicing factor 10) [NCBI Gene 10772] {aka FUSIP1, FUSIP2, NSSR, PPP1R149, SFRS13, SFRS13A}, TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}, CX3CL1 (C-X3-C motif chemokine ligand 1) [NCBI Gene 6376] {aka ABCD-3, C3Xkine, CXC3, CXC3C, NTN, NTT}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, MRC1 (mannose receptor C-type 1) [NCBI Gene 4360] {aka CD206, CLEC13D, CLEC13DL, MMR, MRC1L1, bA541I19.1}, CXCL11 (C-X-C motif chemokine ligand 11) [NCBI Gene 6373] {aka H174, I-TAC, IP-9, IP9, SCYB11, SCYB9B}, TIGIT (T cell immunoreceptor with Ig and ITIM domains) [NCBI Gene 201633] {aka VSIG9, VSTM3, WUCAM}, BCL2 (BCL2 apoptosis regulator) [NCBI Gene 596] {aka Bcl-2, PPP1R50}, RNF128 (ring finger protein 128) [NCBI Gene 79589] {aka GRAIL}, MYB (MYB proto-oncogene, transcription factor) [NCBI Gene 4602] {aka Cmyb, c-myb, c-myb_CDS, efg}, NLRP3 (NLR family pyrin domain containing 3) [NCBI Gene 114548] {aka AGTAVPRL, AII, AVP, C1orf7, CIAS1, CLR1.1}, METTL14 (methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit) [NCBI Gene 57721] {aka hMETTL14}, NAT10 (N-acetyltransferase 10) [NCBI Gene 55226] {aka ALP, Kre33, NET43}, NSUN5 (NOP2/Sun RNA methyltransferase 5) [NCBI Gene 55695] {aka NOL1, NOL1R, NSUN5A, WBSCR20, WBSCR20A, p120}, SRSF1 (serine and arginine rich splicing factor 1) [NCBI Gene 6426] {aka ASF, NEDFBA, SF2, SF2p33, SFRS1, SRp30a}, IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, YTHDC1 (YTH N6-methyladenosine RNA binding protein C1) [NCBI Gene 91746] {aka YT521, YT521-B}
- **Diseases:** infectious diseases (MESH:D003141), nasopharyngeal carcinoma (MESH:D000077274), sepsis (MESH:D018805), ulcerative colitis (MESH:D003093), tissue injury (MESH:D017695), clear cell renal cell carcinoma (MESH:D002292), glioblastoma (MESH:D005909), bladder cancer (MESH:D001749), neointimal hyperplasia (MESH:D006965), HCC (MESH:D006528), ovarian cancer (MESH:D010051), breast cancer (MESH:D001943), triple-negative breast cancer (MESH:D064726), inflammatory bowel disease (MESH:D015212), B-cell malignancies (MESH:D016393), inflammatory cytokines (MESH:D000080424), toxicity (MESH:D064420), inflammatory and immune-related diseases (MESH:D007154), infection (MESH:D007239), AS (MESH:D050197), colorectal cancer (MESH:D015179), tumorigenic (MESH:D002471), bone metastasis (MESH:D009362), restenosis (MESH:D023903), inflammatory arthritis (MESH:D001168), abdominal aortic aneurysm (MESH:D017544), psoriasis (MESH:D011565), metabolic diseases (MESH:D008659), tumorigenesis (MESH:D063646), obesity (MESH:D009765), lung adenocarcinoma (MESH:D000077192), autoimmune diseases (MESH:D001327), gastric and breast cancers (MESH:D013274), fatty liver (MESH:D005234), lung injury (MESH:D055370), CKD (MESH:D051436), acute lung injury (MESH:D055371), Tumor (MESH:D009369), lung cancer (MESH:D008175), NAFLD (MESH:D065626), bone metastatic tumor (MESH:D001859), cervical cancer (MESH:D002583), prostate cancer (MESH:D011471), glioma (MESH:D005910), fibrosis (MESH:D005355), allergic inflammation (MESH:D007249), pancreatic ductal adenocarcinoma (MESH:D021441)
- **Chemicals:** reactive oxygen species (MESH:D017382), glucose (MESH:D005947), PLGA (MESH:D000077182), lipid (MESH:D008055), LPS (MESH:D008070), citrate (MESH:D019343), ATP (MESH:D000255), m6A (MESH:C005955), fatty acid (MESH:D005227), HJ-PI01 (MESH:C000614913), lipoxins (MESH:D044045), 1C8 (-), cisplatin (MESH:D002945), pladienolide B (MESH:C522342), iron (MESH:D007501), TCA (MESH:D014233), prostaglandins (MESH:D011453), Lactate (MESH:D019344), N6-methyladenosine (MESH:C010223), succinate (MESH:D019802), adenosine (MESH:D000241), platinum (MESH:D010984)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090]
- **Mutations:** R132H
- **Cell lines:** GE-9 — Epinephelus awoara (Yellow grouper), Spontaneously immortalized cell line (CVCL_S930)

## Full text

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## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12968222/full.md

## References

98 references — full list in the complete paper: https://tomesphere.com/paper/PMC12968222/full.md

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Source: https://tomesphere.com/paper/PMC12968222