# The bidirectional effects and mechanisms of the oral and gut microbiomes: a narrative review

**Authors:** Tiantian Huo, Xiaofei Huang, Jiayi Liao, Huo Zhang, Li Hu, Mengru Xie

PMC · DOI: 10.3389/fimmu.2026.1697413 · Frontiers in Immunology · 2026-02-23

## TL;DR

This paper reviews how the oral and gut microbiomes influence each other and how their interactions may affect overall health and disease.

## Contribution

It provides a comprehensive overview of the bidirectional effects and mechanisms linking oral and gut microbiomes.

## Key findings

- Oral pathogens like Porphyromonas gingivalis can disrupt gut microbial balance and increase disease risk.
- Gut dysbiosis in conditions like IBS or colorectal cancer can alter the oral microbiome's composition.
- Immune cell migration and inflammation are key mechanisms in the oral-gut microbiome interaction.

## Abstract

Among the microbial ecosystems of the human body, the gut and oral microbiota constitute the two largest communities, collectively harboring thousands of bacteria, fungi, and viruses. Under physiological conditions, these microbiotas maintain internal homeostasis and stability, thereby protecting the host against pathogenic colonization. However, when pathogens such as Porphyromonas gingivalis translocate from the oral cavity to the gut, disruption of gut microbial homeostasis may occur, increasing the risk of disease development. Potential mechanisms underlying this association include the establishment of new symbiotic relationships, the disruption of the intestinal barrier, the activation or suppression of inflammatory cells—particularly the balance between T helper 17 (Th17) cells and regulatory T cells (Tregs)—and the induction of systemic inflammation. Conversely, gut microbiota dysbiosis, as observed in patients with inflammatory bowel disease, irritable bowel syndrome (IBS), or colorectal cancer, is also associated with alterations in the composition and diversity of the oral microbiota. Factors such as immune cell migration, malnutrition, and taste disturbances may contribute to oral microbial imbalance. In this review, we summarize the bidirectional influences on the composition and diversity of the oral and gut microbiomes and propose potential mechanisms underlying their interactions. A deeper understanding of these processes will enhance our knowledge of microbiota–host interactions and systemic health, and may shed light on the prevention and treatment of systemic diseases related to oral and gut microbiota dysbiosis.

## Linked entities

- **Diseases:** inflammatory bowel disease (MONDO:0005265), irritable bowel syndrome (MONDO:0005052), colorectal cancer (MONDO:0005575)
- **Species:** Porphyromonas gingivalis (taxon 837)

## Full-text entities

- **Genes:** KRT82 (keratin 82) [NCBI Gene 3888] {aka HB2, Hb-2, KRTHB2}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, CXCL8 (C-X-C motif chemokine ligand 8) [NCBI Gene 3576] {aka GCP-1, GCP1, IL8, LECT, LUCT, LYNAP}, FOXP3 (forkhead box P3) [NCBI Gene 50943] {aka AIID, DIETER, IPEX, JM2, PIDX, XPID}, TLR9 (toll like receptor 9) [NCBI Gene 54106] {aka CD289}, CCL3 (C-C motif chemokine ligand 3) [NCBI Gene 6348] {aka G0S19-1, LD78, LD78ALPHA, MIP-1-alpha, MIP1A, SCI}, SFTPA2 (surfactant protein A2) [NCBI Gene 729238] {aka COLEC5, ILD2, PSAP, PSP-A, PSPA, SFTP1}, CCL20 (C-C motif chemokine ligand 20) [NCBI Gene 6364] {aka CKb4, Exodus, LARC, MIP-3-alpha, MIP-3a, MIP3A}, RIPK2 (receptor interacting serine/threonine kinase 2) [NCBI Gene 8767] {aka CARD3, CARDIAK, CCK, GIG30, RICK, RIP2}, STAT1 (signal transducer and activator of transcription 1) [NCBI Gene 6772] {aka CANDF7, IMD31A, IMD31B, IMD31C, ISGF-3, STAT91}, IL18 (interleukin 18) [NCBI Gene 3606] {aka IGIF, IL-18, IL-1g, IL1F4}, CCL5 (C-C motif chemokine ligand 5) [NCBI Gene 6352] {aka D17S136E, RANTES, SCYA5, SIS-delta, SISd, TCP228}, mucin [NCBI Gene 100508689], MUC2 (mucin 2, oligomeric mucus/gel-forming) [NCBI Gene 4583] {aka MLP, MUC-2, SMUC}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, TLR4 (toll like receptor 4) [NCBI Gene 7099] {aka ARMD10, CD284, TLR-4, TOLL}, IL22 (interleukin 22) [NCBI Gene 50616] {aka IL-21, IL-22, IL-D110, IL-TIF, ILTIF, TIFIL-23}, NOD1 (nucleotide binding oligomerization domain containing 1) [NCBI Gene 10392] {aka CARD4, CLR7.1, NLRC1, hNod1}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, IL10 (interleukin 10) [NCBI Gene 3586] {aka CSIF, GVHDS, IL-10, IL10A, TGIF}, OCLN (occludin) [NCBI Gene 100506658] {aka BLCPMG, PPP1R115, PTORCH1}, CCL2 (C-C motif chemokine ligand 2) [NCBI Gene 6347] {aka GDCF-2, HC11, HSMCR30, MCAF, MCP-1, MCP1}, SFTPC (surfactant protein C) [NCBI Gene 6440] {aka BRICD6, PSP-C, SFTP2, SMDP2, SP-C}, IGHA1 (immunoglobulin heavy constant alpha 1) [NCBI Gene 3493] {aka IgA1}, IL1B (interleukin 1 beta) [NCBI Gene 3553] {aka IL-1, IL1-BETA, IL1F2, IL1beta}, CD79A (CD79a molecule) [NCBI Gene 973] {aka IGA, IGAlpha, MB-1, MB1}, PECAM1 (platelet and endothelial cell adhesion molecule 1) [NCBI Gene 5175] {aka CD31, CD31/EndoCAM, GPIIA', PECA1, PECAM-1, endoCAM}, AHR (aryl hydrocarbon receptor) [NCBI Gene 196] {aka FVH3, RP85, bHLHe76}, NLRP7 (NLR family pyrin domain containing 7) [NCBI Gene 199713] {aka CLR19.4, HYDM, NALP7, NOD12, OZEMA25, PAN7}, PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 5291] {aka P110BETA, PI3K, PI3KBETA, PIK3C1}, IL17F (interleukin 17F) [NCBI Gene 112744] {aka CANDF6, IL-17F, ML-1, ML1}, ITGAL (integrin subunit alpha L) [NCBI Gene 3683] {aka CD11A, EV6, HNA-5, LFA-1, LFA1A}, SELE (selectin E) [NCBI Gene 6401] {aka CD62E, ELAM, ELAM1, ESEL, LECAM2, selectin-e}, IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}, LY96 (lymphocyte antigen 96) [NCBI Gene 23643] {aka ESOP-1, MD-2, MD2, ly-96}, CDH5 (cadherin 5) [NCBI Gene 1003] {aka 7B4, CD144}, MAPK14 (mitogen-activated protein kinase 14) [NCBI Gene 1432] {aka CSBP, CSBP1, CSBP2, CSPB1, EXIP, Mxi2}, CCL4L2 (C-C motif chemokine ligand 4 like 2) [NCBI Gene 9560] {aka AT744.2, CCL4L, SCYA4L, SCYQ4L2}, IL9 (interleukin 9) [NCBI Gene 3578] {aka HP40, IL-9, P40}, CDH1 (cadherin 1) [NCBI Gene 999] {aka Arc-1, BCDS1, CD324, CDHE, ECAD, LCAM}, CCR6 (C-C motif chemokine receptor 6) [NCBI Gene 1235] {aka BN-1, C-C CKR-6, CC-CKR-6, CCR-6, CD196, CKR-L3}, IFNA1 (interferon alpha 1) [NCBI Gene 3439] {aka IFL, IFN, IFN-ALPHA, IFN-alphaD, IFNA13, IFNA@}, TJP1 (tight junction protein 1) [NCBI Gene 7082] {aka ZO-1}, IL23A (interleukin 23 subunit alpha) [NCBI Gene 51561] {aka IL-23, IL-23A, IL23P19, P19, SGRF}, MAPK8 (mitogen-activated protein kinase 8) [NCBI Gene 5599] {aka JNK, JNK-46, JNK1, JNK1A2, JNK21B1/2, PRKM8}, IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, CRP (C-reactive protein) [NCBI Gene 1401] {aka PTX1}, IL17A (interleukin 17A) [NCBI Gene 3605] {aka CTLA-8, CTLA8, IL-17, IL-17A, IL17, ILA17}, LYZ (lysozyme) [NCBI Gene 4069] {aka AMYLD5, LYZF1, LZM}, HMHB1 (histocompatibility minor HB-1) [NCBI Gene 57824] {aka HB-1, HB-1Y, HLA-HB1}, CX3CL1 (C-X3-C motif chemokine ligand 1) [NCBI Gene 6376] {aka ABCD-3, C3Xkine, CXC3, CXC3C, NTN, NTT}, TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}, NOD2 (nucleotide binding oligomerization domain containing 2) [NCBI Gene 64127] {aka ACUG, BLAU, BLAUS, CARD15, CD, CLR16.3}, REG3G (regenerating family member 3 gamma) [NCBI Gene 130120] {aka LPPM429, PAP IB, PAP-1B, PAP1B, PAPIB, REG III}
- **Diseases:** cytomegalovirus (MESH:D003586), oral diseases (MESH:D009059), colorectal adenoma (MESH:D000236), carcinogenesis (MESH:D063646), protein energy malnutrition (MESH:D011502), diarrhea (MESH:D003967), beta-human papillomavirus infections (MESH:D030361), systemic diseases (MESH:D034721), Periodontitis (MESH:D010518), Inflammation (MESH:D007249), gut diseases (MESH:D004194), Zinc (MESH:C564286), tooth loss (MESH:D016388), taste disturbances (MESH:D013651), colorectal neoplasia (MESH:D009369), Retrovirus (MESH:D012192), Dysbiosis"[Mesh (MESH:D064806), oropharyngeal candidiasis infection (MESH:D009959), IBS (MESH:D043183), resorption (MESH:D014091), IBD (MESH:D015212), Systemic (MESH:D015619), immune dysregulation (OMIM:614878), necrosis (MESH:D009336), intestinal (MESH:D007410), Periodontal disease (MESH:D010510), UC (MESH:D003093), tissue damage (MESH:D017695), Clostridioides difficile infection (MESH:D003015), dental caries (MESH:D003731), endotoxemia (MESH:D019446), epithelial injury (MESH:D009375), Malnutrition (MESH:D044342), oral disorders (MESH:D009056), hypertensive (MESH:D006973), tumorigenic (MESH:D002471), gut disorders (MESH:C536735), viral infections (MESH:D014777), CRC (MESH:D015179), infection (MESH:D007239), CD (MESH:D003424), Colitis (MESH:D003092), bacteremia (MESH:D016470), adenomatous polyposis (MESH:D011125), Ulcerative (MESH:D014456)
- **Chemicals:** clindamycin (MESH:D002981), kynurenine (MESH:D007737), NO (MESH:D009569), amoxicillin (MESH:D000658), methionine (MESH:D008715), Linoleic acid (MESH:D019787), glycerophospholipids (MESH:D020404), phosphate (MESH:D010710), nitrate (MESH:D009566), sugar (MESH:D000073893), oxygen (MESH:D010100), sulfide (MESH:D013440), zinc (MESH:D015032), lactate (MESH:D019344), isoleucine (MESH:D007532), phosphonoacetate (MESH:D010746), carbon (MESH:D002244), lipoteichoic acid (MESH:C009900), ATP (MESH:D000255), DSS (MESH:D016264), ampicillin (MESH:D000667), cysteine (MESH:D003545), lipids (MESH:D008055), LPS (MESH:D008070), acetate (MESH:D000085), tryptophan (MESH:D014364), glucose (MESH:D005947), ROS (MESH:D017382), SCFAs (MESH:D005232), ATCC10556 (-), H2O2 (MESH:D006861), bile acids (MESH:D001647), Hydrogen sulfide (MESH:D006862), sulfur (MESH:D013455), disulfide (MESH:D004220), butyrate (MESH:D002087), amino acids (MESH:D000596), nitrite (MESH:D009573), propionate (MESH:D011422), TCA (MESH:D014238), carbohydrate (MESH:D002241), malondialdehyde (MESH:D008315), fatty acid (MESH:D005227)
- **Species:** Gemella morbillorum (species) [taxon 29391], Mucor (genus) [taxon 4830], Eikenella corrodens (species) [taxon 539], Prevotella intermedia (species) [taxon 28131], Enterococcus faecalis (species) [taxon 1351], Marseillevirus marseillevirus (no rank) [taxon 694581], Veillonella (genus) [taxon 29465], Desulfovibrio (genus) [taxon 872], Neisseria (genus) [taxon 482], Pseudomonadota (proteobacteria, phylum) [taxon 1224], Streptococcus gordonii (species) [taxon 1302], Rothia dentocariosa (species) [taxon 2047], Allobaculum (genus) [taxon 174708], Scardovia (genus) [taxon 196081], Mucispirillum schaedleri (species) [taxon 248039], Parvimonas micra (species) [taxon 33033], Bingvirus (genus) [taxon 2560103], Ruminococcus (genus) [taxon 1263], Enterobacterales (order) [taxon 91347], Bacteroides acidifaciens (species) [taxon 85831], Shigella flexneri (species) [taxon 623], Penicillium (genus) [taxon 5073], Fungi (kingdom) [taxon 4751], Actinomycetota (actinobacteria, phylum) [taxon 201174], Salmonella enterica subsp. enterica serovar Typhimurium (no rank) [taxon 90371], Clostridia (class) [taxon 186801], Campylobacter concisus (species) [taxon 199], Debaryomyces hansenii (species) [taxon 4959], Streptococcus mutans (species) [taxon 1309], Faecalibacterium (genus) [taxon 216851], Prevotella histicola (species) [taxon 470565], Bipolaris (genus) [taxon 33194], Aggregatibacter actinomycetemcomitans (species) [taxon 714], Candida albicans (species) [taxon 5476], Leptotrichia buccalis (species) [taxon 40542], Clostridium perfringens (species) [taxon 1502], Halogranum sp. PV5 (species) [taxon 1089731], Escherichia coli (E. coli, species) [taxon 562], Streptococcus oralis subsp. dentisani (subspecies) [taxon 1458253], Pichia (genus) [taxon 4919], Cheoctovirus (genus) [taxon 1623281], Aspergillus [taxon 40384], Aureobasidium (genus) [taxon 5579], Treponema denticola (species) [taxon 158], Moniliophthora perniciosa (species) [taxon 153609], Eubacterium (genus) [taxon 1730], Murine norovirus (no rank) [taxon 357231], Yersinia enterocolitica (species) [taxon 630], Pseudomonas aeruginosa (species) [taxon 287], Nakaseomyces glabratus (species) [taxon 5478], Mus musculus (house mouse, species) [taxon 10090], Erysiphe pulchra (species) [taxon 225359], Pamexvirus (genus) [taxon 1982355], Porphyromonas endodontalis (species) [taxon 28124], Haemophilus (genus) [taxon 724], Klebsiella pneumoniae (species) [taxon 573], Lactobacillus (genus) [taxon 1578], Streptococcus oralis (species) [taxon 1303], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Streptococcus parasanguinis (species) [taxon 1318]
- **Cell lines:** IEC-6 — Rattus norvegicus (Rat), Finite cell line (CVCL_0343)

## Full text

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## Figures

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## References

148 references — full list in the complete paper: https://tomesphere.com/paper/PMC12968179/full.md

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Source: https://tomesphere.com/paper/PMC12968179