# Generation and characterization of human induced pluripotent stem cells from neuropathologically confirmed multiple system atrophy patient-derived fibroblasts

**Authors:** Mireia Alemany-Ribes, Alexandra Pérez-Soriano, Almudena Santos, Jacqueline Severino, Adrià Dangla-Valls, Martín Gigirey-Suárez, Dory Cohen, Mario Ezquerra, Ruben Fernandez-Santiago, Manel Fernandez, Maria J. Martí, Veerle Baekelandt, Wouter Peelaerts, Ronald Melki, Yaroslau Compta, Laura Batlle-Morera

PMC · DOI: 10.3389/fimmu.2026.1641981 · Frontiers in Immunology · 2026-02-23

## TL;DR

Scientists created human stem cells from MSA patients to study the disease's human-specific mechanisms and develop better treatments.

## Contribution

The generation of six fully characterized iPSC lines from neuropathologically confirmed MSA patients, representing both major clinical variants.

## Key findings

- Six iPSC lines were generated from MSA patient fibroblasts and meet ISSCR quality standards.
- iPSC-derived oligodendrocytes show potential for modeling MSA pathology involving α-synuclein accumulation.
- Stem cells differentiated efficiently into all three germ layers and oligodendrocyte subtypes.

## Abstract

Multiple system atrophy (MSA) is an adult-onset, fatal neurodegenerative disease, classified as a synucleinopathy along with Parkinson’s disease and dementia with Lewy bodies. The etiology of MSA is unknown and the treatment remains symptomatic with limited efficacy. To date most studies have been conducted on genetic mice models, engineered to overexpress α-synuclein (aSyn); and transmission mice models, treated with intracerebral injections of MSA brain extracts or fibrillar aSyn which can be assembled de novo or using MSA seeds. An in vitro human model is urgently needed to identify the human-specific and even patient-specific molecular mechanisms underlying the disease.

For this purpose, we report the generation of six fully characterized induced pluripotent stem cells (iPSCs) lines, which were reprogrammed from disease-derived skin fibroblasts and represent the two major clinical MSA variants with either predominant parkinsonism (MSA-P) or cerebellar dysfunction (MSA-C). Five of these cases received postmortem neuropathological confirmation of definite MSA diagnosis.

The generated iPSC clones meet the International Society for Stem Cell Research (ISSCR) quality standards for genomic stability and functional pluripotency to ensure experimental reproducibility. None of the clones acquired genetic abnormalities after the reprogramming and the extended culture passage, as evaluated by G-banded karyotyping and digital PCR targeting recurrent iPSC copy number variant hotspots. All the clones expressed pluripotent markers as NANOG, LIN28A and SSEA4 and differentiated efficiently into each of the three embryonic germ layers. Furthermore, we assessed their potential for disease modeling by generating oligodendrocytes (OLs), since the pathologic hallmark of MSA is the aberrant accumulation of aSyn within OLs cytoplasm. We obtained both O4+ oligodendrocyte progenitor cells and MBP+ mature oligodendrocyte cells.

We have created a robust and valuable iPSC collection aimed at correlating the in vivo confirmed clinical and pathological variants with the in vitro phenotypes. This unique tool can contribute to the understanding of MSA pathophysiology, the discovery of therapeutic targets, and the development of therapeutic screening approaches.

## Linked entities

- **Genes:** NANOG (Nanog homeobox) [NCBI Gene 79923], LIN28A (lin-28 RNA binding posttranscriptional regulator A) [NCBI Gene 79727], MBP (myelin basic protein) [NCBI Gene 4155], IGKV1D-37 (immunoglobulin kappa variable 1D-37 (non-functional)) [NCBI Gene 28894]
- **Diseases:** Multiple system atrophy (MONDO:0007803), Parkinson’s disease (MONDO:0005180), dementia with Lewy bodies (MONDO:0007488)
- **Species:** Homo sapiens (taxon 9606)

## Full-text entities

- **Genes:** MAPT (microtubule associated protein tau) [NCBI Gene 4137] {aka DDPAC, FTD1, FTDP-17, MAPTL, MSTD, MTBT1}, ID1 (inhibitor of DNA binding 1) [NCBI Gene 3397] {aka ID, bHLHb24}, RPP30 (ribonuclease P/MRP subunit p30) [NCBI Gene 10556] {aka TSG15}, HM13 (histocompatibility minor 13) [NCBI Gene 81502] {aka H13, HM13-IT1, IMP1, IMPAS, IMPAS-1, MSTP086}, HGF (hepatocyte growth factor) [NCBI Gene 3082] {aka DFNB39, F-TCF, HGFB, HPTA, SF}, GDF3 (growth differentiation factor 3) [NCBI Gene 9573] {aka KFS3, MCOP7, MCOPCB6}, EIF4EBP1 (eukaryotic translation initiation factor 4E binding protein 1) [NCBI Gene 1978] {aka 4E-BP1, 4EBP1, BP-1, PHAS-I}, PAX6 (paired box 6) [NCBI Gene 5080] {aka AN, AN1, AN2, ASGD5, D11S812E, FVH1}, APOE (apolipoprotein E) [NCBI Gene 348] {aka AD2, APO-E, ApoE4, LDLCQ5, LPG}, ACTA2 (actin alpha 2, smooth muscle) [NCBI Gene 59] {aka ACTSA, SMDYS}, SNCA (synuclein alpha) [NCBI Gene 6622] {aka NACP, PARK1, PARK4, PD1}, MBP (myelin basic protein) [NCBI Gene 4155], NCAM1 (neural cell adhesion molecule 1) [NCBI Gene 4684] {aka CD56, MSK39, NCAM}, INS (insulin) [NCBI Gene 3630] {aka IDDM, IDDM1, IDDM2, ILPR, IRDN, MODY10}, OLIG2 (oligodendrocyte transcription factor 2) [NCBI Gene 10215] {aka BHLHB1, OLIGO2, PRKCBP2, RACK17, bHLHe19}, KLF4 (KLF transcription factor 4) [NCBI Gene 9314] {aka EZF, GKLF}, KCTD7 (potassium channel tetramerization domain containing 7) [NCBI Gene 154881] {aka CLN14, EPM3}, NCAPD2 (non-SMC condensin I complex subunit D2) [NCBI Gene 9918] {aka CAP-D2, CNAP1, MCPH21, hCAP-D2}, FGA (fibrinogen alpha chain) [NCBI Gene 2243] {aka AMYLD2, Fib2}, IGF1 (insulin like growth factor 1) [NCBI Gene 3479] {aka IGF, IGF-I, IGFI, MGF}, Acta2 (actin alpha 2, smooth muscle, aorta) [NCBI Gene 11475] {aka 0610041G09Rik, Actvs, SMAalpha, SMalphaA, a-SMA, alphaSMA}, MRAP (melanocortin 2 receptor accessory protein) [NCBI Gene 56246] {aka B27, C21orf61, FALP, GCCD2, MRAP1}, GAB1 (GRB2 associated binding protein 1) [NCBI Gene 2549] {aka DFNB26}, MYC (MYC proto-oncogene, bHLH transcription factor) [NCBI Gene 4609] {aka MRTL, MYCC, bHLHe39, c-Myc}, SOX2 (SRY-box transcription factor 2) [NCBI Gene 6657] {aka ANOP3, MCOPS3}, NT3 [NCBI Gene 4877], COQ2 (coenzyme Q2, polyprenyltransferase) [NCBI Gene 27235] {aka CL640, COQ10D1, MSA1, PHB:PPT}, UBE3B (ubiquitin protein ligase E3B) [NCBI Gene 89910] {aka BPIDS, KOS}, GBA1 (glucosylceramidase beta 1) [NCBI Gene 2629] {aka GBA, GCB, GLUC}, LIN28A (lin-28 RNA binding posttranscriptional regulator A) [NCBI Gene 79727] {aka CSDD1, LIN-28, LIN28, ZCCHC1, lin-28A}, SHH (sonic hedgehog signaling molecule) [NCBI Gene 6469] {aka HHG1, HLP3, HPE3, MCOPCB5, SMMCI, ShhNC}, MAP2 (microtubule associated protein 2) [NCBI Gene 4133] {aka MAP-2, MAP2A, MAP2B, MAP2C}, TBX1 (T-box transcription factor 1) [NCBI Gene 6899] {aka CAFS, CATCH22, CTHM, DGCR, DGS, DORV}, BIRC5 (baculoviral IAP repeat containing 5) [NCBI Gene 332] {aka API4, EPR-1}, Afp (alpha fetoprotein) [NCBI Gene 11576], NES (nestin) [NCBI Gene 10763] {aka Nbla00170}, LRRK2 (leucine rich repeat kinase 2) [NCBI Gene 120892] {aka AURA17, DARDARIN, PARK8, RIPK7, ROCO2}, GAPDH (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 2597] {aka G3PD, GAPD, HEL-S-162eP}, SQSTM1 (sequestosome 1) [NCBI Gene 8878] {aka A170, DMRV, EBIAP, FTDALS3, NADGP, OSIL}, STS (steroid sulfatase) [NCBI Gene 412] {aka ARSC, ARSC1, ASC, ES, SSDD, XLI}, USP38 (ubiquitin specific peptidase 38) [NCBI Gene 84640] {aka HP43.8KD}, RPS6KB1 (ribosomal protein S6 kinase B1) [NCBI Gene 6198] {aka PS6K, S6K, S6K-beta-1, S6K1, STK14A, p70 S6KA}, NTF3 (neurotrophin 3) [NCBI Gene 4908] {aka HDNF, NGF-2, NGF2, NT-3, NT3}, GFAP (glial fibrillary acidic protein) [NCBI Gene 2670] {aka ALXDRD}, TUBB3 (tubulin beta 3 class III) [NCBI Gene 10381] {aka CDCBM, CDCBM1, CFEOM3, CFEOM3A, FEOM3, TUBB4}, NANOG (Nanog homeobox) [NCBI Gene 79923], FGF2 (fibroblast growth factor 2) [NCBI Gene 2247] {aka BFGF, FGF-2, FGFB, HBGF-2}, SOX17 (SRY-box transcription factor 17) [NCBI Gene 64321] {aka PPH7, VUR3}, RABGEF1 (RAB guanine nucleotide exchange factor 1) [NCBI Gene 27342] {aka RABEX5, RAP1, rabex-5}, SOAT1 (sterol O-acyltransferase 1) [NCBI Gene 6646] {aka ACACT, ACAT, ACAT-1, ACAT1, SOAT, STAT}, FOXA2 (forkhead box A2) [NCBI Gene 3170] {aka HNF-3-beta, HNF3B, TCF3B}, TENM2 (teneurin transmembrane protein 2) [NCBI Gene 57451] {aka ODZ2, TEN-M2, TEN2, TNM2, ten-2}, CSF1 (colony stimulating factor 1) [NCBI Gene 1435] {aka CSF-1, MCSF, PG-M-CSF}, Lin28a (lin-28 homolog A) [NCBI Gene 83557] {aka Gm10299, Lin-28, Lin28, Tex17, lin-28A}, Tubb3 (tubulin, beta 3 class III) [NCBI Gene 22152] {aka 3200002H15Rik, M(beta)3, M(beta)6}, SLC1A4 (solute carrier family 1 member 4) [NCBI Gene 6509] {aka ASCT1, SATT, SPATCCM}, AFP (alpha fetoprotein) [NCBI Gene 174] {aka AFPD, FETA, HPAFP}, BCL2L1 (BCL2 like 1) [NCBI Gene 598] {aka BCL-XL/S, BCL2L, BCLX, Bcl-X, PPP1R52}, PITX1 (paired like homeodomain 1) [NCBI Gene 5307] {aka BFT, CCF, POTX, PTX1}, F3 (coagulation factor III, tissue factor) [NCBI Gene 2152] {aka CD142, TF, TFA}
- **Diseases:** genetic abnormalities (MESH:D030342), OPCA (MESH:D009849), SVD (MESH:D059345), cerebellar (MESH:D002526), CTE (MESH:D000070627), autonomic dysfunction (MESH:D001342), MSA-C. (MESH:D019578), Alzheimer (MESH:D000544), dementia with Lewy bodies (MESH:D020961), Synucleinopathies (MESH:D000080874), neurodegenerative disease (MESH:D019636), head trauma (MESH:D006259), Parkinson's disease (MESH:D010300), UI (MESH:D014549), Movement Disorder (MESH:D009069), SND (MESH:D020955), neuronal loss (MESH:D009410), stridor (MESH:D012135), amyloid (MESH:C000718787), parkinsonian symptoms (MESH:D010302), OH (MESH:D007024), gliosis (MESH:D005911), rare diseases (MESH:D035583), mycoplasma (MESH:D009175)
- **Chemicals:** biotin (MESH:D001710), glacial acetic acid (MESH:D019342), AA (MESH:D001205), Alexa Fluor 555 (MESH:C000608607), GlutaMax (MESH:C054122), Colcemid (MESH:D003703), vitamin A (MESH:D014801), EDTA (MESH:D004492), F12 (MESH:C007782), N2 (MESH:D009584), Triton X-100 (MESH:D017830), LDN193189 (MESH:C554430), streptomycin (MESH:D013307), methanol (MESH:D000432), P (MESH:D010758), KCl (MESH:D011189), poly-L-ornithine (MESH:C008973), 3,3,5-Triiodo-L-thyronine (MESH:D014284), DMSO (MESH:D004121), 4',6-diamidino-2-phenylindole (MESH:C007293), Polyamine (MESH:D011073), RA (MESH:D011883), SB431542 (MESH:C459179), SYBR Green (MESH:C098022), Emricasan (MESH:C487112), PFA (MESH:C003043), agarose (MESH:D012685), Alexa Fluor 488 (MESH:C000711379), Alexa Fluor 568 (-), hydrogen peroxide (MESH:D006861), S (MESH:D013455), levodopa (MESH:D007980), all-trans retinoic acid (MESH:D014212), penicillin (MESH:D010406), HEPES (MESH:D006531), Alexa Fluor 647 (MESH:C569686)
- **Species:** Ureaplasma urealyticum (species) [taxon 2130], Mesomycoplasma neurolyticum (species) [taxon 2120], Mus musculus (house mouse, species) [taxon 10090], Metamycoplasma hominis (species) [taxon 2098], Mycoplasmopsis pulmonis (species) [taxon 2107], Mycoplasmopsis fermentans (species) [taxon 2115], Metamycoplasma arthritidis (species) [taxon 2111], Gallus gallus (bantam, species) [taxon 9031], Sendai virus [taxon 11191], [Mycoplasma] collis (species) [taxon 2127], Rattus norvegicus (brown rat, species) [taxon 10116], Homo sapiens (human, species) [taxon 9606]
- **Mutations:** V393A, R3104S
- **Cell lines:** MSA01 — Homo sapiens (Human), Multiple system atrophy, Induced pluripotent stem cell (CVCL_AD05), O4 — Mus musculus (Mouse), Hybridoma (CVCL_Z932), fibroblasts — Mus musculus (Mouse), Spontaneously immortalized cell line (CVCL_0594), HDF-ad — Homo sapiens (Human), Induced pluripotent stem cell (CVCL_RJ31)

## Full text

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## Figures

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## References

60 references — full list in the complete paper: https://tomesphere.com/paper/PMC12967983/full.md

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Source: https://tomesphere.com/paper/PMC12967983