# Quantitative Histomorphometric Analysis of Collagen Bundles in Masson's Trichrome Stained Rat (Rattus norvegicus) Skin: A Methodological Study

**Authors:** Okky Husain, Teresa Liliana Wargasetia, Julia Windi Gunadi, Angkasa Ramatuan Hamdan

PMC · DOI: 10.1002/hsr2.71998 · Health Science Reports · 2026-03-08

## TL;DR

This study develops a new method to quantitatively measure collagen in rat skin using Masson's Trichrome staining and image analysis.

## Contribution

The novel protocol enables reproducible, quantitative histomorphometric analysis of collagen in rat skin.

## Key findings

- Collagen-stained areas were significantly larger and more intense than non-collagenous areas.
- Collagen staining showed a symmetrical distribution, while non-collagenous staining was platykurtic and skewed.
- The method provides a validated framework for objective collagen quantification in rat skin.

## Abstract

While Masson's Trichrome is widely used for collagen visualization, its qualitative nature limits reproducibility and statistical comparison. A methodological gap persists in the quantitative assessment of collagen in Rattus norvegicus skin, an important model for dermatological research. This study's objective was to develop a novel, quantitative protocol to precisely measure collagen features, enhancing the study of tissue remodeling and fibrosis.

Formalin‐fixed, paraffin‐embedded skin tissue from Wistar rats was stained with Masson's Trichrome. Digital images were analyzed using ImageJ. The protocol involved creating custom stain vectors for precise color deconvolution, separating the image into blue–green (collagen) and red–pink (non‐collagenous) channels. Quantitative features, including area, intensity, skewness, and kurtosis, were extracted from the thresholded regions of each stain.

Analysis of 168 images showed that the blue–green (collagen) stained area was significantly larger than the red–pink area (p < 0.001). The median collagen area was 1.273 mm² compared to 0.313 mm² for the red–pink area. Collagen stain intensity was also significantly higher (p < 0.001). Distribution shape analysis confirmed distinct signatures: the blue–green stain was highly symmetrical (skewness about 0.07), while the red–pink stain was platykurtic and positively skewed, reflecting its binding to more heterogeneous components.

This work provides a validated framework for the objective and reproducible quantification of collagen in rat skin. By bridging traditional histology with computational analysis, this protocol offers a robust tool for future studies on collagen dynamics in skin pathologies and wound healing, with potential applications in evaluating therapeutic strategies.

## Linked entities

- **Species:** Rattus norvegicus (taxon 10116)

## Full-text entities

- **Genes:** Eln (elastin) [NCBI Gene 25043] {aka RATTREL11, TREL11, Trela, Trela26}
- **Diseases:** fibrosis (MESH:D005355), MT (MESH:D010300)
- **Chemicals:** acetic acid (MESH:D019342), ethanol (MESH:D000431), water (MESH:D014867), xylene (MESH:D014992), xylazine (MESH:D014991), paraffin (MESH:D010232), eosin (MESH:D004801), Formalin (MESH:D005557), phosphomolybdic acid (MESH:C003125), Aniline Blue (MESH:C017006), Picrosirius Red (MESH:C009798), Azan (-), H&amp;E (MESH:D006371), hematoxylin (MESH:D006416)
- **Species:** Rattus (rat, genus) [taxon 10114], Rattus norvegicus (brown rat, species) [taxon 10116], Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

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## References

39 references — full list in the complete paper: https://tomesphere.com/paper/PMC12967519/full.md

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Source: https://tomesphere.com/paper/PMC12967519