# Comprehensive Analysis Reveals Potential Molecular Targets in Juvenile Dermatomyositis

**Authors:** Chunyan Chen, Haifa Qiao

PMC · DOI: 10.1155/bri/1147461 · 2026-03-06

## TL;DR

This study identifies 145 genes and regulatory elements linked to juvenile dermatomyositis, offering new insights into its molecular causes and potential treatments.

## Contribution

The study provides a novel set of molecular targets and regulatory elements (TFs and miRNAs) associated with juvenile dermatomyositis.

## Key findings

- 145 genes were found to be significantly associated with juvenile dermatomyositis.
- Key transcription factors and miRNAs, such as STAT1 and hsa-miR-127-3p, were identified as potential regulators in JDM.
- Enriched biological processes include immune response and extracellular matrix organization.

## Abstract

Juvenile dermatomyositis (JDM) is a rare autoimmune disease primarily affecting children, characterized by muscle weakness and skin lesions. This study identifies 145 genes significantly associated with JDM through differential gene expression analysis, weighted gene coexpression network analysis (WGCNA), protein–protein interaction network analysis, and miRNA and transcription factor (TF) prediction, using blood and muscle microarray sequencing datasets. Functional enrichment analysis indicates that these genes are involved in crucial biological processes, including cytokine‐mediated signaling, extracellular matrix organization, and immune response. Further analysis reveals key TFs (e.g., STAT1 and NFKB1) and miRNAs (e.g., hsa‐miR‐127‐3p and hsa‐miR‐17‐5p) that may regulate the expression of these critical genes in JDM. The findings provide new insights into the molecular mechanisms of JDM and offer potential targets for future diagnostic and therapeutic strategies.

## Linked entities

- **Genes:** STAT1 (signal transducer and activator of transcription 1) [NCBI Gene 6772], NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790]
- **Diseases:** juvenile dermatomyositis (MONDO:0008054)

## Full-text entities

- **Genes:** CXCR4 (C-X-C motif chemokine receptor 4) [NCBI Gene 7852] {aka CD184, D2S201E, FB22, HM89, HSY3RR, LCR1}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}, HIF1A (hypoxia inducible factor 1 subunit alpha) [NCBI Gene 3091] {aka HIF-1-alpha, HIF-1A, HIF-1alpha, HIF1, HIF1-ALPHA, MOP1}, F3 (coagulation factor III, tissue factor) [NCBI Gene 2152] {aka CD142, TF, TFA}, CCR1 (C-C motif chemokine receptor 1) [NCBI Gene 1230] {aka CD191, CKR-1, CKR1, CMKBR1, HM145, MIP1aR}, IL17A (interleukin 17A) [NCBI Gene 3605] {aka CTLA-8, CTLA8, IL-17, IL-17A, IL17, ILA17}, TFRC (transferrin receptor) [NCBI Gene 7037] {aka CD71, IMD46, T9, TFR, TFR1, TR}, EZR (ezrin) [NCBI Gene 7430] {aka CVIL, CVL, HEL-S-105, VIL2}, TWIST2 (twist family bHLH transcription factor 2) [NCBI Gene 117581] {aka AMS, BBRSAY, DERMO1, FFDD3, SETLSS, bHLHa39}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, MIR935 (microRNA 935) [NCBI Gene 100126325] {aka MIRN935, hsa-mir-935, mir-935}, IQGAP1 (IQ motif containing GTPase activating protein 1) [NCBI Gene 8826] {aka HUMORFA01, SAR1, p195}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, CCL5 (C-C motif chemokine ligand 5) [NCBI Gene 6352] {aka D17S136E, RANTES, SCYA5, SIS-delta, SISd, TCP228}, MIR124-3 (microRNA 124-3) [NCBI Gene 406909] {aka MIRN124-3, MIRN124A3, mir-124-3}, STAT1 (signal transducer and activator of transcription 1) [NCBI Gene 6772] {aka CANDF7, IMD31A, IMD31B, IMD31C, ISGF-3, STAT91}, IRF9 (interferon regulatory factor 9) [NCBI Gene 10379] {aka IRF-9, ISGF3, ISGF3G, p48}, CEBPB (CCAAT enhancer binding protein beta) [NCBI Gene 1051] {aka C/EBP-beta, IL6DBP, NF-IL6, TCF5}, LRP1 (LDL receptor related protein 1) [NCBI Gene 4035] {aka A2MR, APOER, APR, CD91, DDH3, IGFBP-3R}, MSC (musculin) [NCBI Gene 9242] {aka ABF-1, ABF1, MYOR, bHLHa22}, Hsa-miR-127-3p [NCBI Gene 100302165], TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, NT5E (5'-nucleotidase ecto) [NCBI Gene 4907] {aka CALJA, CD73, E5NT, NT, NT5, NTE}, STAT4 (signal transducer and activator of transcription 4) [NCBI Gene 6775] {aka DPMC, SLEB11}, NCOA3 (nuclear receptor coactivator 3) [NCBI Gene 8202] {aka ACTR, AIB-1, AIB1, CAGH16, CTG26, KAT13B}, TFEC (transcription factor EC) [NCBI Gene 22797] {aka TCFEC, TFE-C, TFEC-L, TFECL, bHLHe34, hTFEC-L}, ZNF469 (zinc finger protein 469) [NCBI Gene 84627] {aka BCS, BCS1, Zfp469}, CD163 (CD163 molecule) [NCBI Gene 9332] {aka M130, MM130, SCARI1}
- **Diseases:** T-cell leukemia virus 1 infection (MESH:D015458), viral infections (MESH:D014777), coronavirus disease (MESH:D018352), diabetic cardiomyopathy (MESH:D058065), Herpes simplex virus 1 infection (MESH:D006561), COVID-19 (MESH:D000086382), carcinogenesis (MESH:D063646), cytomegalovirus infection (MESH:D003586), autoimmune disease (MESH:D001327), Dermatomyositis (MESH:D003882), skin lesions (MESH:D012871), influenza A (MESH:D007251), Epstein-Barr virus infection (MESH:D020031), inflammation (MESH:D007249), muscle weakness (MESH:D018908), nonalcoholic fatty liver disease (MESH:D065626)
- **Chemicals:** ATP (MESH:D000255), reactive oxygen species (MESH:D017382), iron (MESH:D007501)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Figures

17 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12966348/full.md

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Source: https://tomesphere.com/paper/PMC12966348